Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H15
         (256 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p pro...    27   3.5  
AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-P...    26   6.0  
AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-P...    26   6.0  

>AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p
           protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 107 LGSLKCFIKRLLAKMNVLFIRNI-CSAG-RQAIMCFLMSASIFTLSYFSGGV 256
           LG L  F K LLA  N+LFI  + C  G  +A+  F     +   + F GG+
Sbjct: 24  LGMLLLFDKGLLAIGNILFISGLACVIGVERAMRFFFQRHKVKGTTAFLGGI 75


>AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-PA,
           isoform A protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 107 LGSLKCFIKRLLAKMNVLFIRNI-CSAGRQAIMCFLMSA-SIFTLSYFSGGV 256
           LG L  F K LLA  N+LFI  + C  G +  M F      +   + F GG+
Sbjct: 24  LGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFFQRHKVKGTTAFLGGI 75


>AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-PB,
           isoform B protein.
          Length = 140

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 107 LGSLKCFIKRLLAKMNVLFIRNI-CSAGRQAIMCFLMSA-SIFTLSYFSGGV 256
           LG L  F K LLA  N+LFI  + C  G +  M F      +   + F GG+
Sbjct: 24  LGMLLLFDKGLLAIGNILFISGLACVIGVERTMRFFFQRHKVKGTTAFLGGI 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,691,519
Number of Sequences: 53049
Number of extensions: 141562
Number of successful extensions: 177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)