Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H15
         (256 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   2.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   3.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    20   4.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   4.1  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    19   7.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    19   7.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   9.6  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 175 LLCREAGDYVLFDVCINIYLIIFLWR 252
           ++C+    Y L D   NI+ + + W+
Sbjct: 14  IVCQAKAHYSLRDFKANIFQVKYQWK 39


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 116 LKCFIKRLLAKMNVLFIRN 172
           LKC+   +L K NV+  +N
Sbjct: 68  LKCYFNCVLEKFNVMDKKN 86


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 187 EAGDYVLFDVCINIYLIIFL 246
           EAG+ V   + I + L++FL
Sbjct: 260 EAGEKVTLGISILLSLVVFL 279


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 216 DIKKHIIACLPAEQ 175
           D+KK++  CLP  Q
Sbjct: 431 DLKKNLKVCLPPGQ 444


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 246 EKYDKVNID 220
           +KYD VNID
Sbjct: 25  DKYDYVNID 33


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 246 EKYDKVNID 220
           +KYD VNID
Sbjct: 25  DKYDYVNID 33


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 166 KKHLLCREAGDYVLFDVCINIYL 234
           KKH   R       FD+  NIY+
Sbjct: 630 KKHRAIRPEPIDAQFDIIQNIYI 652


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,219
Number of Sequences: 438
Number of extensions: 1029
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)