Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H11
(192 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 1.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 2.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 3.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 3.1
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 20 3.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 19 5.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 19 7.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 7.1
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 18 9.4
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 18 9.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 18 9.4
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 18 9.4
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 1.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 143 DDDDYWN 163
D DDYWN
Sbjct: 526 DSDDYWN 532
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 14 SAEGQIVLNIFFYC 55
S GQ++ FFYC
Sbjct: 302 SLHGQLLWREFFYC 315
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 65 TKNHNRKIYLAQFDP 21
T HN YL+ DP
Sbjct: 311 TTRHNATCYLSHVDP 325
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -2
Query: 158 SNHRHPW 138
S+H HPW
Sbjct: 125 SSHEHPW 131
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein
protein.
Length = 238
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 65 TKNHNRKIYLAQFDP 21
T HN YL+ DP
Sbjct: 17 TTRHNATCYLSHVDP 31
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 110 TLLHKNINICN*YV*TKNHNRKIY 39
+L +K I+ N Y KN+N+K+Y
Sbjct: 317 SLSNKTIHNNNNY---KNYNKKLY 337
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 18.6 bits (36), Expect = 7.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 24 VKLC*IYFSIVIFCLYILITDIYIFM 101
VKL + F + CL ++I + I M
Sbjct: 390 VKLVLLNFGWQMICLIVVIALVSIIM 415
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 18.6 bits (36), Expect = 7.1
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 181 ISSFTCVPV 155
+SS+ CVP+
Sbjct: 691 LSSYNCVPI 699
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/11 (45%), Positives = 5/11 (45%)
Frame = -2
Query: 170 HLCSSNHRHPW 138
HLC PW
Sbjct: 46 HLCGKAFSRPW 56
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -3
Query: 184 FISSFTCVPVIIVIHGNSSIVQIVLH 107
F SS CV + + G + ++++LH
Sbjct: 108 FGSSEECVALDLDGQGGRTFLRVLLH 133
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 119 LYN*AITMDDDDYWNT 166
LYN +D DYW +
Sbjct: 183 LYNNKNFVDLSDYWKS 198
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -3
Query: 184 FISSFTCVPVIIVIHGNSSIVQIVLH 107
F SS CV + + G + ++++LH
Sbjct: 76 FGSSEECVALDLDGQGGRTFLRVLLH 101
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,350
Number of Sequences: 438
Number of extensions: 1061
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used: 2550180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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