Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H10
(312 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 178 6e-46
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 178 6e-46
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 178 6e-46
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 54 3e-08
06_01_0198 + 1529190-1530371 28 1.8
02_05_0591 - 30183105-30183869 28 1.8
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 27 2.3
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 3.1
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 27 3.1
11_06_0434 - 23512921-23513529 27 4.1
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 27 4.1
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 4.1
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 26 5.4
07_03_0137 + 14101849-14102511 26 5.4
12_02_1110 + 26154024-26154314,26154400-26154944,26155023-261551... 26 7.2
11_03_0093 - 9852075-9852871,9852911-9853009,9853208-9853646,985... 26 7.2
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 26 7.2
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 26 7.2
12_02_0005 + 12192100-12192474 25 9.5
05_04_0374 - 20736615-20737037,20737148-20737639,20738145-207384... 25 9.5
05_01_0437 + 3471154-3471447,3471664-3471858,3472619-3472741,347... 25 9.5
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 25 9.5
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368... 25 9.5
02_04_0044 - 19198001-19199236 25 9.5
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 178 bits (434), Expect = 6e-46
Identities = 80/101 (79%), Positives = 95/101 (94%)
Frame = +2
Query: 8 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGK 187
AG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGK
Sbjct: 10 AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK 69
Query: 188 PELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 310
P+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KG
Sbjct: 70 PDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKG 110
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 178 bits (434), Expect = 6e-46
Identities = 80/101 (79%), Positives = 95/101 (94%)
Frame = +2
Query: 8 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGK 187
AG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGK
Sbjct: 10 AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK 69
Query: 188 PELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 310
P+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KG
Sbjct: 70 PDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKG 110
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 178 bits (434), Expect = 6e-46
Identities = 80/101 (79%), Positives = 95/101 (94%)
Frame = +2
Query: 8 AGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGK 187
AG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++ATVKKGK
Sbjct: 27 AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK 86
Query: 188 PELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKG 310
P+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KG
Sbjct: 87 PDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKG 127
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 53.6 bits (123), Expect = 3e-08
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +2
Query: 56 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 226
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 227 RQRKPFRRRDGVFIYFEDNAGVIVNNKG 310
R R DG I F+DNA V+VNNKG
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKG 139
>06_01_0198 + 1529190-1530371
Length = 393
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 201 FLSSGLPFLTVATIMSPEPAAGNLFRRPLIPCTAITYRFF 82
+L++ L L VAT++S P AG L +P T F+
Sbjct: 171 YLAAALGALLVATLLSSSPFAGALASLAALPATRFARSFW 210
>02_05_0591 - 30183105-30183869
Length = 254
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 307 LVVHDDPRIILEIYEHPVPPSKWFPLPDHHCWHYLFP 197
+V H D ++ +Y P P P HH +H L P
Sbjct: 157 MVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMP 193
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 207 TFFLSSGLPFLTVATIMSPEPAAGNLFRRPLIPC 106
T+ ++G F ++++ SPE GN F+ ++ C
Sbjct: 422 TYLKAAGNSFAVLSSVSSPEVPCGNCFKVEILYC 455
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 186 LPFLTVATIMSPEPAAGNLFRRPLIPCTAITYR 88
LP+ ++ P PAA L+ RP P + R
Sbjct: 333 LPYPPYPAVLLPPPAAATLYGRPPAPAPGVAAR 365
>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 27.1 bits (57), Expect = 3.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 250 PSKWFPLPDHHCW 212
P WFP PD +CW
Sbjct: 1420 PWFWFPSPDRNCW 1432
>11_06_0434 - 23512921-23513529
Length = 202
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +2
Query: 65 ADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPF 244
AD+ V V+ + + AG GD VA +GK L ++ + A++ + KP+
Sbjct: 4 ADDAKVTRRKVRMVKAVVYEVEAAATAGEGDTPVA---EGKVRLSQESVDAILAEETKPY 60
Query: 245 RRRDGVFIYFEDNAGV 292
+ F +DN V
Sbjct: 61 PNME-YFRSLKDNPAV 75
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 280 ILEIYEHPVPPSKWFPLPDHHCWHYLFP-EFWFAFLN 173
IL Y+H +P L + HC + P + W F+N
Sbjct: 737 ILGCYDHLLPEHIRLDLQEQHCNDHKVPDDLWLEFIN 773
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 47 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSG 154
GA CA+ T A + +A +GI+G N P G G
Sbjct: 625 GAGAGCANQTAAVRVDGVAYRGIRGTYN--PRGGGG 658
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -1
Query: 303 LFTMTPALSSKY-MNTPSRLLNGFRCLITT--AGITFFLSSGLPFLTVATIMSPEPAAGN 133
L T P + M SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 132 LFR 124
LF+
Sbjct: 97 LFQ 99
>07_03_0137 + 14101849-14102511
Length = 220
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 166 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRG 261
G +R +E G A +GD +T +AGRG
Sbjct: 85 GRGGQRDAGDEEDGKAGAGDGGLQTNQRAGRG 116
>12_02_1110 +
26154024-26154314,26154400-26154944,26155023-26155109,
26155237-26155293,26155369-26155607,26155715-26155833,
26155945-26156031,26156117-26156194
Length = 500
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 222 TTAGITFFLSSGLPFLTVATIMSPEPAAGNLFRRPLIPCTAITYRFFAPV---LSAQLIT 52
T I F PFL + + AAG L+ R L+P + + F P+ L AQ I
Sbjct: 134 TAIVIAFLYWYAGPFLRLIGQAADVAAAGQLYARGLVP-QLLAFALFCPMQRFLQAQNIV 192
Query: 51 AP 46
P
Sbjct: 193 NP 194
>11_03_0093 -
9852075-9852871,9852911-9853009,9853208-9853646,
9853803-9854129
Length = 553
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 231 SGNHLEGGTGCSYISRIMRGS 293
S NHL+ TG ++ S+++RG+
Sbjct: 123 SRNHLDAATGGAFFSKMVRGA 143
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 LSAQLITAPTGRPSEMRNFAPAS 4
++A+ TAP+GRP FAP++
Sbjct: 295 ITARPTTAPSGRPPRRPTFAPSA 317
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -3
Query: 124 TTLDTLYGNHIQIFCSCIICTIDHSSH 44
T +D+++G + + SC C++ SH
Sbjct: 361 TVIDSIFGGQLSVTSSCKHCSVRSLSH 387
>12_02_0005 + 12192100-12192474
Length = 124
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 12 ERSSASRWVSQWEL*SIVQI 71
ER RW+S+W++ +I+ +
Sbjct: 100 EREGGGRWISRWDVGAILSV 119
>05_04_0374 -
20736615-20737037,20737148-20737639,20738145-20738422,
20738576-20738732
Length = 449
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 238 FPLPDHHCWHYLFPEFWFA 182
+PLP++ WHY +F ++
Sbjct: 389 YPLPNNQFWHYPMDQFTYS 407
>05_01_0437 +
3471154-3471447,3471664-3471858,3472619-3472741,
3473245-3473430,3473633-3473766,3473866-3474052,
3474179-3474280
Length = 406
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 98 IAVQGIKGRLNRLPAAGSGD 157
+ VQ + RLNRL +A SGD
Sbjct: 108 LQVQRCRARLNRLASASSGD 127
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 203 KVMPAVVIRQRKPFRRRDGVFIYFED 280
K P VV+R KP + D VFI + D
Sbjct: 272 KYGPRVVVRCTKPINKGDEVFITYID 297
>02_05_0965 +
33136373-33136512,33136595-33136688,33136845-33136889,
33137007-33137174,33137247-33137331,33137531-33137637,
33137918-33137998,33138232-33138284,33138361-33138460,
33138911-33139054,33139268-33139364,33139528-33139611,
33139904-33140123,33140204-33140297,33140406-33140975,
33141348-33141449,33141564-33141656,33141834-33141836
Length = 759
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = -3
Query: 247 SKWFPLPDHHCWHYLFPEFWFAFLNCGHNHVTRTSSW*PVQTTLDTLYGNHIQIFCSC 74
S F + + WHYL + FL + R S+ + +GN F SC
Sbjct: 572 SSSFVEEEQYTWHYLTSTLYLIFLIKTTQSMLRESNSAVARAEGKIFHGNDCSYFTSC 629
>02_04_0044 - 19198001-19199236
Length = 411
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 268 YEHPVPPSKWFPLPDHH 218
++HP PP+K +PD H
Sbjct: 91 FDHPYPPTKTMFVPDPH 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,566,210
Number of Sequences: 37544
Number of extensions: 240945
Number of successful extensions: 719
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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