Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H10
(312 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 0.65
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 0.86
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 1.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 1.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 1.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 1.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 1.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 1.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 3.5
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 3.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 4.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 4.6
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 4.6
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 20 8.0
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 20 8.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 8.0
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 0.65
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 336 LYYNIINIEQIPVPVPVYCG-NFPPR 360
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 0.86
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 334 LYYNIINIEQIPVPVPIYCG-NFPPR 358
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 117 WFPFDDQHC 125
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 71 YLHN*SQLPLGDPARCGTSLPPR 3
Y+ N Q+P+ P CG + PPR
Sbjct: 109 YIINIEQIPVPVPIYCG-NFPPR 130
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 185 WFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 1.1
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -3
Query: 241 WFPLPDHHC 215
WFP D HC
Sbjct: 185 WFPFDDQHC 193
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 71 YLHN*SQLPLGDPARCGTSLPPR 3
Y+ N Q+P+ P CG + PPR
Sbjct: 350 YIINIEQIPVPVPIYCG-NFPPR 371
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 112 LQYYNIINIEQIPVPVPIYCG-NFPPR 137
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 83 LLLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y + N Q+P+ P CG + PPR
Sbjct: 108 LQYYNIINIEQIPVPVPIYCG-NFPPR 133
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 109 LYYNINYIEQIPIPVPVYCG-NFPPR 133
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 30 RWVSQWEL*SIVQIIQEQK 86
R+VSQWE I+Q +Q+++
Sbjct: 227 RYVSQWEEVYILQNLQKKR 245
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 342 LYYNINYIEQIPIPVPVYCG-NFPPR 366
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 80 LLYYLHN*SQLPLGDPARCGTSLPPR 3
L Y ++ Q+P+ P CG + PPR
Sbjct: 342 LYYNINYIEQIPIPVPVYCG-NFPPR 366
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 3.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 250 PSKWFPLPDHHCWHYLF 200
PSK + LPD+ YL+
Sbjct: 245 PSKEYDLPDYRGEEYLY 261
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 3.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 250 PSKWFPLPDHHCWHYLF 200
PSK + LPD+ YL+
Sbjct: 245 PSKEYDLPDYRGEEYLY 261
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.6 bits (41), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 148 TSSW*PVQTTLDTLYGNHIQIFCS 77
T++ P+ +T T+ NH+ CS
Sbjct: 327 TTTTSPMTSTKSTIVRNHLNSTCS 350
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 53 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSG 154
+IN +++ G K AV+ +N A+GSG
Sbjct: 571 IINSSNDEGGKTSPNSAVRKCMSPINGSGASGSG 604
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.6 bits (41), Expect = 4.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -1
Query: 279 SSKYMNTPSRLLNGFRCLITTAGI 208
+ KY N P L F TAG+
Sbjct: 215 NDKYSNVPYFLFGDFNFRTDTAGV 238
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 19.8 bits (39), Expect = 8.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 121 TLDTLYGNHIQIFCS 77
TLD ++G Q+F S
Sbjct: 157 TLDMMFGKIYQVFAS 171
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 19.8 bits (39), Expect = 8.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 121 TLDTLYGNHIQIFCS 77
TLD ++G Q+F S
Sbjct: 157 TLDMMFGKIYQVFAS 171
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 8.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 201 FLSSGLPFLTVATIMSPEPAAGNLFRRPLIP 109
F S +PF++ I++ P + RP+IP
Sbjct: 1034 FHYSVVPFVSNHDILNLRPLSMEKGTRPMIP 1064
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,457
Number of Sequences: 438
Number of extensions: 2661
Number of successful extensions: 42
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6595479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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