Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H09
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical prote...    23   5.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   7.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   9.6  

>AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical protein
           13 protein.
          Length = 56

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 120 QDNAIVQFKIKKHTPLRKLM 179
           Q N I+Q  +K+  PLR+L+
Sbjct: 21  QGNEIIQNVVKRSIPLRQLI 40


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +3

Query: 234 DGQPINENDTPTSLEM---EEGDTIEV-YQQQTGGFSLV*IKYKELSI 365
           DG P+++ND  T L      E DT  V Y + T   S   I Y EL++
Sbjct: 279 DGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTFWCS---ISYYELNL 323


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 260 VIFVYWLP 237
           VIF+YWLP
Sbjct: 349 VIFLYWLP 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,553
Number of Sequences: 2352
Number of extensions: 7205
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)