Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H09
(401 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 180 6e-46
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 180 6e-46
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 180 6e-46
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 180 6e-46
AE013599-2934|AAF57531.1| 242|Drosophila melanogaster CG15905-P... 31 0.43
AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p pro... 29 2.3
AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA... 29 2.3
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 4.1
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 4.1
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 4.1
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 4.1
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 4.1
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 4.1
BT003588-1|AAO39591.1| 439|Drosophila melanogaster LD08055p pro... 28 5.4
AY119572-1|AAM50226.1| 436|Drosophila melanogaster LD03212p pro... 28 5.4
AE013599-3322|AAM68202.1| 435|Drosophila melanogaster CG11474-P... 28 5.4
AE013599-3321|AAF46793.1| 436|Drosophila melanogaster CG11474-P... 28 5.4
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 180 bits (438), Expect = 6e-46
Identities = 85/88 (96%), Positives = 87/88 (98%), Gaps = 1/88 (1%)
Frame = +3
Query: 66 MSDEKKG-ESEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 242
MSDEKKG E+EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 243 PINENDTPTSLEMEEGDTIEVYQQQTGG 326
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 180 bits (438), Expect = 6e-46
Identities = 85/88 (96%), Positives = 87/88 (98%), Gaps = 1/88 (1%)
Frame = +3
Query: 66 MSDEKKG-ESEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 242
MSDEKKG E+EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 243 PINENDTPTSLEMEEGDTIEVYQQQTGG 326
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 180 bits (438), Expect = 6e-46
Identities = 85/88 (96%), Positives = 87/88 (98%), Gaps = 1/88 (1%)
Frame = +3
Query: 66 MSDEKKG-ESEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 242
MSDEKKG E+EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 243 PINENDTPTSLEMEEGDTIEVYQQQTGG 326
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 180 bits (438), Expect = 6e-46
Identities = 85/88 (96%), Positives = 87/88 (98%), Gaps = 1/88 (1%)
Frame = +3
Query: 66 MSDEKKG-ESEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 242
MSDEKKG E+EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 243 PINENDTPTSLEMEEGDTIEVYQQQTGG 326
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE013599-2934|AAF57531.1| 242|Drosophila melanogaster CG15905-PA
protein.
Length = 242
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 243 PINENDTPTSLEMEEGDTIEVYQQQTGGFSLV*IKYKELSI 365
PI E +TPT+ EM + + Q+QTG F+ + + K+++I
Sbjct: 18 PIEEAETPTTSEMPDSGRVVFDQRQTGRFN-IHVSIKDVAI 57
>AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p
protein.
Length = 422
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 213 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 305
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418
>AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA
protein.
Length = 424
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 213 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 305
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2939 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 2998
Query: 297 IEVYQ 311
+V++
Sbjct: 2999 TDVFR 3003
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2945 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 3004
Query: 297 IEVYQ 311
+V++
Sbjct: 3005 TDVFR 3009
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2888 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 2947
Query: 297 IEVYQ 311
+V++
Sbjct: 2948 TDVFR 2952
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2888 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 2947
Query: 297 IEVYQ 311
+V++
Sbjct: 2948 TDVFR 2952
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2945 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 3004
Query: 297 IEVYQ 311
+V++
Sbjct: 3005 TDVFR 3009
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 120 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VRFRFDGQPINENDTPTSLEMEEGDT 296
Q N I Q K T + + D AG +++ + FD +PI+E TP++ D
Sbjct: 2945 QQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDM 3004
Query: 297 IEVYQ 311
+V++
Sbjct: 3005 TDVFR 3009
>BT003588-1|AAO39591.1| 439|Drosophila melanogaster LD08055p
protein.
Length = 439
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 387 SKLHHFRKWTVPYI*FTLKKTRPSAADRLLLYHLLPFR 274
S L HF WT PY + + + PS DRL L+ F+
Sbjct: 329 SPLEHF--WTSPYEFYRMPEVNPSLYDRLKEAQLVIFK 364
>AY119572-1|AAM50226.1| 436|Drosophila melanogaster LD03212p
protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 387 SKLHHFRKWTVPYI*FTLKKTRPSAADRLLLYHLLPFR 274
S L HF WT PY + + + PS DRL L+ F+
Sbjct: 326 SPLEHF--WTSPYEFYRMPEVNPSLYDRLKEAQLVIFK 361
>AE013599-3322|AAM68202.1| 435|Drosophila melanogaster CG11474-PB,
isoform B protein.
Length = 435
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 387 SKLHHFRKWTVPYI*FTLKKTRPSAADRLLLYHLLPFR 274
S L HF WT PY + + + PS DRL L+ F+
Sbjct: 325 SPLEHF--WTSPYEFYRMPEVNPSLYDRLKEAQLVIFK 360
>AE013599-3321|AAF46793.1| 436|Drosophila melanogaster CG11474-PA,
isoform A protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 387 SKLHHFRKWTVPYI*FTLKKTRPSAADRLLLYHLLPFR 274
S L HF WT PY + + + PS DRL L+ F+
Sbjct: 326 SPLEHF--WTSPYEFYRMPEVNPSLYDRLKEAQLVIFK 361
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,094,426
Number of Sequences: 53049
Number of extensions: 332033
Number of successful extensions: 770
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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