Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H07
         (237 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p pro...    43   5e-05
AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p pro...    43   5e-05
AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA ...    43   5e-05

>BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p
           protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +1

Query: 73  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRINRNVSMNIEF 234
           I+ A L+V   A  + DCGS+      V + GC     EC+L+ N  VS +I+F
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDF 60


>AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p
           protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +1

Query: 73  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRINRNVSMNIEF 234
           I+ A L+V   A  + DCGS+      V + GC     EC+L+ N  VS +I+F
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDF 60


>AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA
           protein.
          Length = 148

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +1

Query: 73  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRINRNVSMNIEF 234
           I+ A L+V   A  + DCGS+      V + GC     EC+L+ N  VS +I+F
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDF 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,373,174
Number of Sequences: 53049
Number of extensions: 177140
Number of successful extensions: 361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)