Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H06
         (196 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   1.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   2.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    20   3.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   3.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    20   3.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   7.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               18   9.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 123 IELPRCYEKNNRRLIKKKIETN 58
           IE PR   +N   LIKK    N
Sbjct: 584 IEFPRSITRNATALIKKLCRDN 605


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 84  NAYCFFHSNAA 116
           N +C+F  NAA
Sbjct: 536 NTFCYFRRNAA 546


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 46  RILVVCFNFFLY*TPIVFFI 105
           ++ V C   + Y  P++F I
Sbjct: 218 KVFVTCIFIWAYVIPLIFII 237


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 114 AARSKNKKMPEQPIKLYYLPP 176
           AAR  N +   Q  K  Y+PP
Sbjct: 136 AAREDNDEEEAQKPKEQYIPP 156


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 46  RILVVCFNFFLY*TPIVFFI 105
           ++ V C   + Y  P++F I
Sbjct: 218 KVFVTCIFIWAYVIPLIFII 237


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 141 PEQPIKLY 164
           P+QPIKL+
Sbjct: 439 PKQPIKLF 446


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 36  ETIQNSSGLFQFFSLLNAYCFFH 104
           ++IQN     + + L+  Y  FH
Sbjct: 100 KSIQNEDPCEKAYQLVKCYVEFH 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,149
Number of Sequences: 438
Number of extensions: 964
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)