Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H04
(274 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 29 3.5
BC064384-1|AAH64384.1| 769|Homo sapiens ABCB9 protein protein. 29 3.5
BC017348-1|AAH17348.1| 596|Homo sapiens ABCB9 protein protein. 29 3.5
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 29 3.5
AL833963-1|CAD38811.1| 453|Homo sapiens hypothetical protein pr... 29 3.5
AK074738-1|BAC11171.1| 472|Homo sapiens protein ( Homo sapiens ... 29 3.5
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 29 3.5
AF216494-1|AAF89993.1| 766|Homo sapiens ATP-binding cassette pr... 29 3.5
AB177852-1|BAD66830.1| 796|Homo sapiens KIAA1520 splice variant... 29 3.5
AB112583-1|BAC98410.1| 681|Homo sapiens TAP-Like isoform 12C pr... 29 3.5
AB112582-1|BAC98409.1| 683|Homo sapiens TAP-Like isoform 12B pr... 29 3.5
AB045381-1|BAA97989.2| 766|Homo sapiens TAPL protein. 29 3.5
AB040953-1|BAA96044.2| 810|Homo sapiens KIAA1520 protein protein. 29 3.5
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 29 3.5
BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein FL... 28 6.1
BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein. 28 6.1
AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens ... 28 6.1
AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens ... 28 6.1
AK000289-1|BAA91058.1| 363|Homo sapiens protein ( Homo sapiens ... 28 6.1
AL139415-5|CAC42429.1| 308|Homo sapiens carbonic anhydrase VI p... 27 8.1
AF128418-1|AAF22565.1| 308|Homo sapiens carbonic anhydrase VI p... 27 8.1
AB102863-1|BAD89397.1| 313|Homo sapiens carbonic anhydrase VI n... 27 8.1
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 156 HLKEIQKIYELTRKSYTKYMFL 91
HLK++ +ELT+K Y +Y FL
Sbjct: 900 HLKQLLSDHELTKKLYKRYAFL 921
>BC064384-1|AAH64384.1| 769|Homo sapiens ABCB9 protein protein.
Length = 769
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>BC017348-1|AAH17348.1| 596|Homo sapiens ABCB9 protein protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 156 HLKEIQKIYELTRKSYTKYMFL 91
HLK++ +ELT+K Y +Y FL
Sbjct: 561 HLKQLLSDHELTKKLYKRYAFL 582
>AL833963-1|CAD38811.1| 453|Homo sapiens hypothetical protein
protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 199 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 233
>AK074738-1|BAC11171.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ90257 fis, clone NT2RM4000444, weakly similar to
ANTIGEN PEPTIDE TRANSPORTER 1. ).
Length = 472
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 96 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 130
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 156 HLKEIQKIYELTRKSYTKYMFL 91
HLK++ +ELT+K Y +Y FL
Sbjct: 485 HLKQLLSDHELTKKLYKRYAFL 506
>AF216494-1|AAF89993.1| 766|Homo sapiens ATP-binding cassette
protein ABCB9 protein.
Length = 766
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>AB177852-1|BAD66830.1| 796|Homo sapiens KIAA1520 splice variant 1
protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 420 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 454
>AB112583-1|BAC98410.1| 681|Homo sapiens TAP-Like isoform 12C
protein.
Length = 681
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>AB112582-1|BAC98409.1| 683|Homo sapiens TAP-Like isoform 12B
protein.
Length = 683
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>AB045381-1|BAA97989.2| 766|Homo sapiens TAPL protein.
Length = 766
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 390 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 424
>AB040953-1|BAA96044.2| 810|Homo sapiens KIAA1520 protein protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 159 VHLKEIQKIYELTRKSYTKYMFL*YIQEETL*LVQ 55
V+L+++Q++Y+L RK YM+ + TL +VQ
Sbjct: 434 VYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQ 468
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 156 HLKEIQKIYELTRKSYTKYMFL 91
HLK++ +ELT+K Y +Y FL
Sbjct: 972 HLKQLLSDHELTKKLYKRYAFL 993
>BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein
FLJ11171 protein.
Length = 770
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 262 PVAISLPDISASNLDISSCICWYIVESSMVKRLLCTP*RNPKDLRT 125
P S+ + +ASNL+ C W+I+E + ++ C+P N + L+T
Sbjct: 476 PGQSSILEGTASNLE---CHLWHILEGKKLPKVKCSPFCNGEILKT 518
>BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein.
Length = 770
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 262 PVAISLPDISASNLDISSCICWYIVESSMVKRLLCTP*RNPKDLRT 125
P S+ + +ASNL+ C W+I+E + ++ C+P N + L+T
Sbjct: 476 PGQSSILEGTASNLE---CHLWHILEGKKLPKVKCSPFCNGEILKT 518
>AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ13121 fis, clone NT2RP3002687. ).
Length = 586
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 262 PVAISLPDISASNLDISSCICWYIVESSMVKRLLCTP*RNPKDLRT 125
P S+ + +ASNL+ C W+I+E + ++ C+P N + L+T
Sbjct: 292 PGQSSILEGTASNLE---CHLWHILEGKKLPKVKCSPFCNGEILKT 334
>AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ11171 fis, clone PLACE1007317, weakly similar to
Drosophila melanogaster Adrift mRNA. ).
Length = 770
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 262 PVAISLPDISASNLDISSCICWYIVESSMVKRLLCTP*RNPKDLRT 125
P S+ + +ASNL+ C W+I+E + ++ C+P N + L+T
Sbjct: 476 PGQSSILEGTASNLE---CHLWHILEGKKLPKVKCSPFCNGEILKT 518
>AK000289-1|BAA91058.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ20282 fis, clone HEP03828. ).
Length = 363
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 262 PVAISLPDISASNLDISSCICWYIVESSMVKRLLCTP*RNPKDLRT 125
P S+ + +ASNL+ C W+I+E + ++ C+P N + L+T
Sbjct: 92 PGQSSILEGTASNLE---CHLWHILEGKKLPKVKCSPFCNGEILKT 134
>AL139415-5|CAC42429.1| 308|Homo sapiens carbonic anhydrase VI
protein.
Length = 308
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 168 RFTMEDSTIY--QHMQDEMSRFEAEISGSEIATGGLR 272
R T+ D T+Y Q M +EISGSE G+R
Sbjct: 96 RMTVADGTVYIAQQMHFHWGGASSEISGSEHTVDGIR 132
>AF128418-1|AAF22565.1| 308|Homo sapiens carbonic anhydrase VI
protein.
Length = 308
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 168 RFTMEDSTIY--QHMQDEMSRFEAEISGSEIATGGLR 272
R T+ D T+Y Q M +EISGSE G+R
Sbjct: 96 RMTVADGTVYIAQQMHFHWGGASSEISGSEHTVDGIR 132
>AB102863-1|BAD89397.1| 313|Homo sapiens carbonic anhydrase VI nirs
variant 1 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 168 RFTMEDSTIY--QHMQDEMSRFEAEISGSEIATGGLR 272
R T+ D T+Y Q M +EISGSE G+R
Sbjct: 96 RMTVADGTVYIAQQMHFHWGGASSEISGSEHTVDGIR 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,531,007
Number of Sequences: 237096
Number of extensions: 822215
Number of successful extensions: 1269
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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