Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H04
         (274 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA...    27   3.6  
AY071420-1|AAL49042.1|  302|Drosophila melanogaster RE50009p pro...    26   6.3  
AE014297-279|AAF52006.1|  302|Drosophila melanogaster CG2931-PA ...    26   6.3  
U09808-1|AAC24234.1|  249|Drosophila melanogaster tsg protein.         26   8.3  
AY122068-1|AAM52580.1|  853|Drosophila melanogaster AT11715p pro...    26   8.3  
AE014298-1731|AAF48123.1|  249|Drosophila melanogaster CG1502-PA...    26   8.3  
AE013599-1541|AAM68635.1|  853|Drosophila melanogaster CG8811-PB...    26   8.3  
AE013599-1540|AAF58483.2|  853|Drosophila melanogaster CG8811-PA...    26   8.3  

>AE014297-1879|AAF55082.2| 2002|Drosophila melanogaster CG3389-PA
            protein.
          Length = 2002

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 132  KSFGFL*GVHSRRFTMEDSTIYQHMQDEMSRFEAEISGSEIATGGL 269
            + FG+    HSR+    +S  Y     E+  +EA  S  E  TGGL
Sbjct: 1553 QQFGYDRFKHSRQLRSTESNEYGPEDAELLSYEAYDSSQEDPTGGL 1598


>AY071420-1|AAL49042.1|  302|Drosophila melanogaster RE50009p
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 10/15 (66%), Positives = 15/15 (100%)
 Frame = +3

Query: 198 QHMQDEMSRFEAEIS 242
           ++++DE+SRFEAEIS
Sbjct: 6   RNIEDELSRFEAEIS 20


>AE014297-279|AAF52006.1|  302|Drosophila melanogaster CG2931-PA
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 10/15 (66%), Positives = 15/15 (100%)
 Frame = +3

Query: 198 QHMQDEMSRFEAEIS 242
           ++++DE+SRFEAEIS
Sbjct: 6   RNIEDELSRFEAEIS 20


>U09808-1|AAC24234.1|  249|Drosophila melanogaster tsg protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 130 VNLLDFFKVYIVGVLPWRTPLYTNIC-KMKCPDLKQKYLVVRS 255
           + LL +F +  VG+ PW +    + C ++ C  +  K L+ +S
Sbjct: 1   MQLLCYFVILFVGIAPWSSLANDDGCNEVVCGSVVSKCLITQS 43


>AY122068-1|AAM52580.1|  853|Drosophila melanogaster AT11715p
           protein.
          Length = 853

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 182 LHGKTPTMYTLKKSKRFTN*REKVTLNIC 96
           LHG+   MYT  + K + + RE   + +C
Sbjct: 186 LHGQDDPMYTSARMKNYNSLREVEIIKLC 214


>AE014298-1731|AAF48123.1|  249|Drosophila melanogaster CG1502-PA
           protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 130 VNLLDFFKVYIVGVLPWRTPLYTNIC-KMKCPDLKQKYLVVRS 255
           + LL +F +  VG+ PW +    + C ++ C  +  K L+ +S
Sbjct: 1   MQLLCYFVILFVGIAPWSSLANDDGCNEVVCGSVVSKCLITQS 43


>AE013599-1541|AAM68635.1|  853|Drosophila melanogaster CG8811-PB,
           isoform B protein.
          Length = 853

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 182 LHGKTPTMYTLKKSKRFTN*REKVTLNIC 96
           LHG+   MYT  + K + + RE   + +C
Sbjct: 186 LHGQDDPMYTSARMKNYNSLREVEIIKLC 214


>AE013599-1540|AAF58483.2|  853|Drosophila melanogaster CG8811-PA,
           isoform A protein.
          Length = 853

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 182 LHGKTPTMYTLKKSKRFTN*REKVTLNIC 96
           LHG+   MYT  + K + + RE   + +C
Sbjct: 186 LHGQDDPMYTSARMKNYNSLREVEIIKLC 214


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,742,286
Number of Sequences: 53049
Number of extensions: 237089
Number of successful extensions: 582
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)