Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H04
         (274 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   0.30 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   0.52 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   0.52 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   2.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   2.8  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    20   6.4  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 0.30
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 173 KTPTMYTLKKSKRFTN*REKVTLNICFYNTYKRKHYDWYRI 51
           + P++   KKS  +   R  V     F+ TYK++ Y W ++
Sbjct: 121 RNPSVVGRKKSSGWRKLRNIVHWTP-FFQTYKKQRYPWVQL 160


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 0.52
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 95  FYNTYKRKHYDWYRI 51
           F+ TYK++ Y W ++
Sbjct: 231 FFQTYKKQRYPWVQL 245


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 0.52
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 95  FYNTYKRKHYDWYRI 51
           F+ TYK++ Y W ++
Sbjct: 465 FFQTYKKQRYPWVQL 479


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 59  YRICVKVILIFYYRIEIPS 3
           +  C+ +ILI YY  +I S
Sbjct: 218 FSYCIPMILIIYYYSQIVS 236


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 120 SLVRKSFGFL*GVHSRRFTMEDSTIYQHMQDEMSRFEAEISGSEIATG 263
           +L  ++FG    +     T  DS++    +D     E EIS + ++TG
Sbjct: 263 TLCHETFGSKKTMELHIKTHSDSSVVGSPRDSPIEPEIEISQNSVSTG 310


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 165 YYVHLKEIQKIYELTRKSYTKYMFL 91
           Y +HLKEI+    +   +Y  ++++
Sbjct: 107 YLIHLKEIEDTEPILLIAYIYHLYM 131


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 48  CESNLNFLLPHRNT 7
           C    N  LPHRN+
Sbjct: 100 CSKTSNPCLPHRNS 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,598
Number of Sequences: 438
Number of extensions: 2040
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)