Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H02
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 46 7e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 46 7e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 4e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 4e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 4e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 42 1e-04
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 33 0.090
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 33 0.090
Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical pr... 32 0.16
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 32 0.16
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 31 0.21
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 31 0.36
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 31 0.36
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 0.48
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 0.48
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 0.48
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 0.48
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 30 0.63
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 29 0.83
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical pr... 29 1.1
AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical ... 29 1.1
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 29 1.1
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 29 1.1
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 1.5
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 1.9
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 28 2.5
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 28 2.5
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 27 3.4
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 27 3.4
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 27 3.4
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 27 3.4
Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical pr... 27 4.5
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 27 4.5
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 27 5.9
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 27 5.9
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 27 5.9
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 27 5.9
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 26 7.8
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 26 7.8
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 26 7.8
U20862-6|AAK95884.1| 100|Caenorhabditis elegans Hypothetical pr... 26 7.8
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 26 7.8
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 26 7.8
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 26 7.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 26 7.8
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 46.4 bits (105), Expect = 7e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 402 DMNSKMIGAKPLYVALAQRKEDRRAQL 428
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 46.4 bits (105), Expect = 7e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 402 DMNSKMIGAKPLYVALAQRKEDRRAQL 428
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.0 bits (99), Expect = 4e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
EMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 316 EMNSKMVCSKPLYVAIAQRKEDRRAQL 342
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 44.0 bits (99), Expect = 4e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
EMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 313 EMNSKMVCSKPLYVAIAQRKEDRRAQL 339
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 4e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
EMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 376 EMNSKMVCSKPLYVAIAQRKEDRRAQL 402
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2
Query: 17 EMNGRIVGTKPLYVALAQRKEDRKAHL 97
EMN ++V +KPLYVA+ QRKEDR+A L
Sbjct: 376 EMNSKMVCSKPLYVAIGQRKEDRRAQL 402
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 32.7 bits (71), Expect = 0.090
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 189 PPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAY--ANMQPPYRPP 341
P Y + Q Q P+ A P V+P QTPAS+Y QPPY P
Sbjct: 2075 PTYQQPPVQQFQPQQQQQYYQPQQQALPQVQPQFQTPASSYGGGQAQPPYYWP 2127
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 32.7 bits (71), Expect = 0.090
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 189 PPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAY--ANMQPPYRPP 341
P Y + Q Q P+ A P V+P QTPAS+Y QPPY P
Sbjct: 700 PTYQQPPVQQFQPQQQQQYYQPQQQALPQVQPQFQTPASSYGGGQAQPPYYWP 752
>Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical
protein T07G12.3 protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 217 WSEHKCRKYDLHPDGLPNHL*DQALKHLHRLTQICNHPTVLQT 345
W + K+++H + L NHL ++ L H+HR + N + +T
Sbjct: 504 WCICQVDKFEIHNETLKNHLGEKLLNHVHRKLKKLNVSEICET 546
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 189 PPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQPPYRPP 341
PP ++ N +AQM Q + P A PPV P PA + + PY P
Sbjct: 152 PPEMM-NHQAYQAQMRQQQQQPNGQAPPPVYPPFGQPAPQMSGQRMPYPYP 201
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 31.5 bits (68), Expect = 0.21
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 213 MMVRAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQPPYRPPNKSSN 356
+ +R MP+ P+ A+PP +RPSTQ+ +S + +PP P SN
Sbjct: 39 LALRPVMPESTPSVAVPAKPPPLRPSTQSVSS--TDPRPPIPPRRSESN 85
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 0.27
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGCI 368
P P T PP P+T TP + + Q P+ S+ TG I
Sbjct: 492 PVPTTTNTPPANPTTATPTTVGTSKQTNTISPHLSTITGSI 532
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.36
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 192 PYLLFNAMMVRAQ--MPQIRPTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTG 362
P ++ A RA PQ PPVRPST T S++AN +S+ G
Sbjct: 133 PSFMYPASSARANPAKPQATGYRNTVRHPPVRPSTATGHSSFANRSAYSHHTTRSTTVG 191
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +3
Query: 171 QEDTLFPPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQPP------Y 332
Q+ FP Y + +A PQ P P + PP+ TQ ++ M PP Y
Sbjct: 517 QQSPQFPSYQQ-SPQQQQAPPPQRSPIPLSQSLPPLNSMTQQQRASMQQMPPPNSGPLQY 575
Query: 333 RPPNK 347
PPN+
Sbjct: 576 SPPNQ 580
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGCI 368
P P T PP P+ +P A PP PP S TG +
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGCI 368
P P T PP P+ +P A PP PP S TG +
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGCI 368
P P T PP P+ +P A PP PP S TG +
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Frame = +3
Query: 204 FNAMMVRAQMPQIRPTPRWTAQP-----------PVRPSTQTPASAYANMQPPYRPP 341
+N V Q PQ RP P+ QP P +P Q PA QP Y PP
Sbjct: 2019 YNPQPVVVQRPQFRPQPQPRPQPQPQPQPQPQPQPQQPYIQRPALTLPFQQPQYPPP 2075
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +3
Query: 228 QMPQIRPTP---RWTAQPPVRPSTQTPASAYANMQPPYRPPNKSS 353
Q Q RPTP R PP+ P T P+S P PP SS
Sbjct: 1452 QSQQTRPTPTTHRPGITPPLAPKTIYPSSLQTGSSSP-TPPGTSS 1495
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 29.9 bits (64), Expect = 0.63
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 MPQIRPTPRWTAQPP-VRPSTQTPASAYANMQPPYRPPNKSSN 356
MP+ P+ A+PP +RPSTQ+ +S + +PP P SN
Sbjct: 1 MPESTPSVAVPAKPPPLRPSTQSVSS--TDPRPPIPPRRSESN 41
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 29.5 bits (63), Expect = 0.83
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 100 SQMGFA-VFLALS*SNIKRFCSNNTSIHFS 14
SQ+GF V+ N++ F +NNTSIH S
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNNTSIHLS 180
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 186 FPPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQT-PASAYANMQPPYRP-PNKSSNT 359
F P L A + PTP + + PP PST + P+ A A PP P P + S
Sbjct: 395 FTPEQLAAAFAQQQIAQSAAPTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGN 453
Query: 360 G 362
G
Sbjct: 454 G 454
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 186 FPPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQT-PASAYANMQPPYRP-PNKSSNT 359
F P L A + PTP + + PP PST + P+ A A PP P P + S
Sbjct: 423 FTPEQLAAAFAQQQIAQSAAPTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGN 481
Query: 360 G 362
G
Sbjct: 482 G 482
>Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 212 SVKQEVWWEQSIL--LHYLVGISDPFVAYAYLPCVACTVKSNGLCGLPCV---ELKQHKE 48
S+K W IL L+YL SDP + + L C ++ NGL + CV + H +
Sbjct: 150 SIKAWKKWTTQILSALNYLHS-SDPPIIHGNLTCNTVFIQQNGLIKIGCVAPDAINHHVK 208
Query: 47 VLFQ--QYVHSFQPRAE 3
+ +Y+H P E
Sbjct: 209 TCRENMRYMHYIAPEYE 225
>AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 212 SVKQEVWWEQSIL--LHYLVGISDPFVAYAYLPCVACTVKSNGLCGLPCV---ELKQHKE 48
S+K W IL L+YL SDP + + L C ++ NGL + CV + H +
Sbjct: 150 SIKAWKKWTTQILSALNYLHS-SDPPIIHGNLTCNTVFIQQNGLIKIGCVAPDAINHHVK 208
Query: 47 VLFQ--QYVHSFQPRAE 3
+ +Y+H P E
Sbjct: 209 TCRENMRYMHYIAPEYE 225
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 186 FPPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQT-PASAYANMQPPYRP-PNKSSNT 359
F P L A + PTP + + PP PST + P+ A A PP P P + S
Sbjct: 395 FTPEQLAAAFAQQQIAQSAAPTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSGN 453
Query: 360 G 362
G
Sbjct: 454 G 454
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 191 TIPPV*RYDGPSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSK 343
T+ P +T + TT T PTT + H T + TT+PS++
Sbjct: 85 TVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVPSTQ 135
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 240 IRPTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNK 347
++ PR T +PP RP+T T +A A P R K
Sbjct: 1113 LKSPPRNTKKPPSRPTTATRPTAVAARTAPPRSARK 1148
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 240 IRPTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNK 347
++ PR T +PP RP+T T +A A P R K
Sbjct: 1113 LKSPPRNTKKPPSRPTTATRPTAVAARTAPPRSARK 1148
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNT 359
P P T PP P+T TP + P P N ++ T
Sbjct: 492 PVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPT 529
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 228 QMPQIRPT-PRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGCITY 374
Q P+ + T WT PP + QTP + A PP PP T +TY
Sbjct: 391 QTPRTKQTWAPWT--PPTTTTRQTPPTTQA---PPITPPPYRPPTSVVTY 435
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKS 350
P P AQPPV+ Q P QPP +PP ++
Sbjct: 419 PPPVQNAQPPVQQQQQPP------QQPPQQPPQQN 447
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKS 350
P P AQPPV+ Q P QPP +PP ++
Sbjct: 405 PPPVQNAQPPVQQQQQPP------QQPPQQPPQQN 433
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKS 350
P P AQPPV+ Q P QPP +PP ++
Sbjct: 408 PPPVQNAQPPVQQQQQPP------QQPPQQPPQQN 436
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 252 PRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGC 365
PR ++ R S+Q P A MQ + P K S GC
Sbjct: 517 PRMSSASEQRKSSQPPQPA-VRMQTQFEEPRKYSQNGC 553
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 252 PRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTGC 365
PR ++ R S+Q P A MQ + P K S GC
Sbjct: 533 PRMSSASEQRKSSQPPQPA-VRMQTQFEEPRKYSQNGC 569
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 234 PQIRPTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTG 362
P+ PTP+ A V QT ++ ++ PP PP++ G
Sbjct: 150 PKAAPTPQSPAPNRVPHYRQTSTASVSSTIPPPPPPHRKQENG 192
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +3
Query: 156 SNQVVQEDTLFPPYLLFNAMMVRAQMPQIRPT-----PRWTAQPPVRPSTQTPASAYANM 320
SN ++ T+ PP F +V+ P +R WT +P +T+TP + + +
Sbjct: 337 SNSIIDATTIRPPDFNF-IPIVQENTPDMREAFINNNGAWTMEPTTEQTTETPPPS-STL 394
Query: 321 QPP 329
PP
Sbjct: 395 PPP 397
>Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical
protein T03D8.4 protein.
Length = 440
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 155 FQPSSAGGYFVPTIPPV*RYDGPSTNAANTTYTPMDCPTTCKTKHSNTC-IGLRKYATTL 331
F + G P P RY +TN Y P P + SNT + + Y T
Sbjct: 225 FVDTKQGSPIEPYPPREIRYAYRTTNRQPVVYVPSASPVNQPSHASNTVPVAVASYLVTA 284
Query: 332 PSSKQELQ 355
S Q +Q
Sbjct: 285 NPSSQPIQ 292
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 228 QMPQIRPTPRWTAQPPVRPSTQTPAS---AYANMQPPYRPPNKSSNTGC 365
Q+ + P P + QP + TP+S AY+ PP P N+ N C
Sbjct: 292 QLHILPPIP--SPQPQIIYQQTTPSSQFVAYSTFAPPIEPSNECGNGQC 338
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 249 TPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSNTG 362
TP W P + PS T + +NM+ P+ S N G
Sbjct: 94 TPGWNDPPSMLPSAGTTPNRLSNMRRRPVDPSISGNVG 131
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical protein
C26H9A.2 protein.
Length = 1334
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 273 PVRPSTQTPASAYANMQPPYRPPNKSSNTGC 365
P+R T T A A N PP + P+++++ C
Sbjct: 1045 PIRLLTVTRAVAPPNSDPPSKKPSQTAHLAC 1075
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 221 PSTNAANTTYTPMDCPTTCK---TKHSNTCIGLRKYATTLPSSK 343
P+T TT TP+DC C +S+ C + T ++K
Sbjct: 353 PTTTTPTTTRTPVDCSAKCDPFWVSYSDGCYAKIQGTATFETAK 396
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
protein R09A8.1 protein.
Length = 1095
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 31 YCWNKTSLCCFSSTQGRPQSPFDFTVHATHGKYAYATNGS 150
YC T++ FSSTQ + F TV + +Y+ T+ +
Sbjct: 563 YCEFATNVIYFSSTQNASEEDFGNTVSSDVSQYSARTSNN 602
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 228 QMPQIRPTPRWTAQPPVRPSTQTPASAYAN 317
Q+ Q++PT T Q PV STQ PAS A+
Sbjct: 157 QLCQLQPT---TIQSPVYASTQQPASTSAS 183
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 273 PVRPSTQTPASAYANMQPPYRPPNKSSNT 359
P +PS P S+Y +P Y P ++ S++
Sbjct: 86 PPQPSYSPPKSSYGRPEPTYSPYSRPSSS 114
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 RPTPRWTAQPPVRP--STQTPASAYANMQPPYRPPNKSSNT 359
RP PR AQ P P +TQ PA + P R P S T
Sbjct: 93 RPPPRKLAQTPRPPVVTTQRPAPPQSRPPPVTRRPTFISTT 133
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 243 RPTPRWTAQPPVRP--STQTPASAYANMQPPYRPPNKSSNT 359
RP PR AQ P P +TQ PA + P R P S T
Sbjct: 93 RPPPRKLAQTPRPPVVTTQRPAPPQSRPPPVTRRPTFISTT 133
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 158 QPSSAGGYFVPTIPPV*RYDGPSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTL-P 334
+ ++ G F T+P GPS+ A N+ + C + +T + + + +TT P
Sbjct: 827 ETQTSDGTFTMTVPNDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGP 886
Query: 335 SS 340
SS
Sbjct: 887 SS 888
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 177 DTLFPPYLLFNAMMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQPPYRP 338
DT F Y N+ + P P P QPP ++ TPA + A P P
Sbjct: 809 DTFFLQYAS-NSQPLSTLPPPPPPNPPPAPQPPSSAASLTPAPSAAQNAPSIAP 861
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTPASAYANMQPPYRPPNKSSN 356
PT WT+Q P P + ++ P+ NK+ N
Sbjct: 11 PTAAWTSQQPRSPRMFDQENGFSQNFQPFMQQNKTVN 47
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 222 RAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQPP 329
R + P+ P P+ A VRP T+ P + +PP
Sbjct: 572 RTEPPRTEP-PKTEAPRTVRPKTEAPMTVPPRTEPP 606
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 359 CVGALVWRTVGWLHICVSRCRCLSAWSYRWLGSPS 255
CV L W++V +LH +S L AW + SPS
Sbjct: 138 CVSPLGWKSVYFLHAAISMVVFL-AWFAVFTDSPS 171
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 283 QALKHLHRLTQICNHPTVLQTRAP 354
+A ++ LT ICNHP + ++ +P
Sbjct: 486 KAFVGINHLTNICNHPGIYRSLSP 509
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
protein F37D6.1 protein.
Length = 1227
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 335 TVGWLHICVSRCRCLSAWSYRW 270
TVGW+ CV + + +S Y+W
Sbjct: 566 TVGWVVECVKQRKMISVEGYQW 587
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 213 MMVRAQMPQIRPTPRWTAQPPVRPSTQTPASAY 311
++V +R P+ A PP +P Q PA A+
Sbjct: 107 IVVDVAKKSVRSAPKRLAPPPSQPIVQAPAPAH 139
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 221 PSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSKQELQHRL 364
P+T+ TT + PTT T + T L LP KQ+L RL
Sbjct: 122 PTTSTTTTTTSTTPVPTTTTTTEAATTTVLTTTTEELP--KQQLAGRL 167
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 279 RPSTQTPASAYANMQPPYRPPNKSSNT 359
+PST P +M PP +PP++ +++
Sbjct: 1153 KPSTPRPPRFRISMSPPRKPPSEKNDS 1179
>U20862-6|AAK95884.1| 100|Caenorhabditis elegans Hypothetical
protein W06E11.7 protein.
Length = 100
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 270 PPVRPSTQTPASAYANMQPPYRPPNKSSNT 359
PPV + T S+ PP+ P N S+NT
Sbjct: 55 PPVE-NAPTGGSSSMGQSPPHHPANTSTNT 83
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 152 IFQPSSAGGYFVPTIPPV*RYDGPSTNAANTTYTPMD 262
+ P G P PPV R PST++ PMD
Sbjct: 646 LLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMD 682
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 152 IFQPSSAGGYFVPTIPPV*RYDGPSTNAANTTYTPMD 262
+ P G P PPV R PST++ PMD
Sbjct: 646 LLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMD 682
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 152 IFQPSSAGGYFVPTIPPV*RYDGPSTNAANTTYTPMD 262
+ P G P PPV R PST++ PMD
Sbjct: 646 LLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMD 682
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 246 PTPRWTAQPPVRPSTQTP---ASAYANMQPPYRPPNKSSNT 359
P P+ T PP P+ + A YA+ +PP P S T
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPT 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,860,220
Number of Sequences: 27780
Number of extensions: 227563
Number of successful extensions: 1082
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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