Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H01
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 222 9e-59
03_01_0034 + 318432-318825,318902-319851 220 5e-58
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 220 5e-58
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 220 5e-58
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 219 7e-58
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 219 7e-58
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 218 2e-57
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 214 3e-56
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 82 2e-16
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 81 3e-16
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 81 3e-16
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 80 7e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 40 7e-04
01_05_0465 + 22485728-22485835,22486125-22486955 29 1.4
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 1.8
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 29 1.8
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 1.8
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 3.1
02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475 28 3.1
11_01_0595 + 4732330-4732723,4732839-4732903,4733023-4733143,473... 28 4.2
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 28 4.2
12_02_0352 - 17862577-17863528,17864076-17864827 27 5.5
07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837 27 5.5
06_03_1183 + 28237467-28237612,28238035-28238089,28238216-282383... 27 7.3
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 27 7.3
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 27 7.3
01_01_0757 - 5840736-5842574 27 7.3
11_06_0338 + 22479804-22480651,22480764-22482954 27 9.6
09_01_0092 - 1311892-1312055,1312490-1312574,1312628-1312936,131... 27 9.6
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 27 9.6
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 27 9.6
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 27 9.6
01_03_0075 - 12218501-12218611,12219028-12219267,12219698-122198... 27 9.6
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 222 bits (543), Expect = 9e-59
Identities = 99/116 (85%), Positives = 112/116 (96%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKMAATF+GN
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY+
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 220 bits (537), Expect = 5e-58
Identities = 99/116 (85%), Positives = 110/116 (94%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGN
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 220 bits (537), Expect = 5e-58
Identities = 98/116 (84%), Positives = 111/116 (95%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGN
Sbjct: 332 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGN 391
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 392 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 447
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 220 bits (537), Expect = 5e-58
Identities = 98/116 (84%), Positives = 111/116 (95%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGN
Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 219 bits (536), Expect = 7e-58
Identities = 97/116 (83%), Positives = 111/116 (95%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GN
Sbjct: 491 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGN 550
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 551 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 606
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 219 bits (536), Expect = 7e-58
Identities = 98/116 (84%), Positives = 111/116 (95%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGN
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY+
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 218 bits (533), Expect = 2e-57
Identities = 98/116 (84%), Positives = 111/116 (95%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGN
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY+
Sbjct: 371 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 214 bits (522), Expect = 3e-56
Identities = 95/116 (81%), Positives = 109/116 (93%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL MA+TF+GN
Sbjct: 327 LTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGN 386
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
ST+IQE+F+ +SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQY+
Sbjct: 387 STSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQ 442
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I N+TA+ E+F I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I NST++ E+F I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 ISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 81.4 bits (192), Expect = 3e-16
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATF 172
++RG + K+V+ + +I+ + + FV+W P K + PP + + A
Sbjct: 399 MYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCM 458
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I N+TA+ E+F I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 459 ISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 80.2 bits (189), Expect = 7e-16
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I NST++ E+F I +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 ISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 40.3 bits (90), Expect = 7e-04
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 196
I +G + +V E + I+ + F+EW P +++ + GL +A N T+I+
Sbjct: 325 IIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVS-------GLMLA-----NHTSIR 372
Query: 197 ELF-KCISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 340
LF KC+ Q+ + +++AFL Y E D EF E+ + LV EY+
Sbjct: 373 HLFSKCLG-QYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>01_05_0465 + 22485728-22485835,22486125-22486955
Length = 312
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 83 SSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFK-CIS 217
++YF++ P N DIPP + +I + ++ EL CIS
Sbjct: 99 ATYFIQHRPKNTAADFPDIPPAARESLDAYIAQAVSLAELLAGCIS 144
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 286 LVH-ALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHG 125
LVH ALA + A+ + +RDAL L + + GRR +AG A G
Sbjct: 96 LVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAG 150
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 318 FMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMHLNSSWMAVELP 175
F L AS S SP Y C ALR + + H+ +SW +P
Sbjct: 286 FSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVGGAHVFTSWFLEFVP 333
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -2
Query: 322 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAG 143
+VH A LHLVHA++ V L E S EL D + L V + R AG
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTSLVRTKARIVEGDAG 124
Query: 142 R 140
+
Sbjct: 125 K 125
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 309 LSASVNSISSMPSPVYQCKKALRLNIAVN 223
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>02_02_0647 - 12613356-12614040,12615034-12615219,12617168-12617475
Length = 392
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 339 WYSETRSFMLLSASVNSISS---MPSPVYQCKKALRLNIAVNCSEMHL 205
W T+ ++ L+ +V + SS M P+ C K+LRL + SE L
Sbjct: 138 WTMRTKQYLELAVAVLASSSSGDMMIPITSCLKSLRLRDCIKISEKGL 185
>11_01_0595 +
4732330-4732723,4732839-4732903,4733023-4733143,
4733596-4733687,4733850-4733915,4734106-4734125,
4734147-4734239,4734358-4734445,4734570-4734635,
4734728-4734843,4735410-4735500,4736133-4736234,
4736342-4736425,4736551-4736643,4736728-4736823,
4736914-4736999,4737528-4737606,4737675-4737788,
4737890-4737985,4738060-4738123,4738221-4738510,
4738901-4738956,4739060-4739177,4739287-4739367,
4739683-4739762,4740001-4740055,4740142-4740211,
4740279-4740468,4740567-4740690,4741055-4741129,
4741217-4741390
Length = 1112
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 160 HLQSAGRDV-AHGGLHVVRDPFHEVRRV 80
H + G +V A GGLHV+ HE RR+
Sbjct: 742 HCSTEGAEVKALGGLHVIGTSLHESRRI 769
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 32 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 202
++MKE+DE++ + +++ Y ++ I N + PR L M A +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 203 FKCI 214
K +
Sbjct: 179 MKML 182
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 253 ESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRD 104
E ++S GE + +L+ GG D+G R ++AH + V D
Sbjct: 4 EMISSAVVGETLNRVVSRLVSGGSHNDDGMRGNSMERLEMAHSRMEAVLD 53
>07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837
Length = 730
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 101 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKCISEQFTAMFRR 244
WI N VK + D+P G K+ FI +++ Q+ A ++R
Sbjct: 568 WITNKVKESWSDVPLHGNKI-EWFINQGDMVKKAIASFPFQYQANYKR 614
>06_03_1183 +
28237467-28237612,28238035-28238089,28238216-28238354,
28238433-28238487,28238578-28238646,28239338-28239560,
28239645-28239740,28240708-28240827,28240937-28241062,
28241369-28241524,28242706-28242828,28242913-28242980,
28243119-28243254,28243365-28243530,28243615-28243853
Length = 638
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRV 80
L+ L+ +G +T+E RR + D GG+H+ +D V +
Sbjct: 75 LYNAILKAESEGVMLTEEARRAATTLRVDFEKGGIHLPKDKLEHVNHL 122
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 330 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEM 211
E RS LL A N + +PS + + LN++ N S++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDL 303
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Frame = -2
Query: 283 VHALAGVPVQESLASEHSGELFRDALEQL--------LDGGRVTDEGRRHLQSAGRDVAH 128
V+A+ G+ V E L +E+ L + L+ G+ G+R ++ GR++
Sbjct: 235 VNAVEGLKVYEGLVNENEKNKILSLLNETKASFRRGGLEAGQTVIIGKRPMKGHGREIIQ 294
Query: 127 GGLHVVRDPFHE--VRRVLVLNVKHLLIDFLHR 35
G+ +V P + R V V LL D R
Sbjct: 295 LGIPIVEGPPEDDYPRETKVEAVPGLLHDLFDR 327
>01_01_0757 - 5840736-5842574
Length = 612
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 107 PNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKCISEQFTAMFRRKAFLHWYTG 271
PN + +V R + A GNST L I +Q+T ++ LH Y G
Sbjct: 139 PNGIVWSVSKDVTRYASLLAA--GNSTLAVYLGNLIDDQYTGVYHANITLHLYFG 191
>11_06_0338 + 22479804-22480651,22480764-22482954
Length = 1012
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 226 ELFRDALEQLLDGGRVTDEGRRH 158
E +++ +LL GGR+TD RH
Sbjct: 18 EPLHESISKLLKGGRITDARERH 40
>09_01_0092 -
1311892-1312055,1312490-1312574,1312628-1312936,
1314155-1314229,1314363-1314438,1315594-1315679,
1315958-1316203,1316399-1316614
Length = 418
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 309 LSASVNSISSMPSPVYQCKKALRLNIAV 226
L+ S N+IS +P + C K RLN+ V
Sbjct: 207 LNESNNTISVLPDELAGCSKLFRLNLEV 234
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 112 QREDRRVRHPAPRTEDG 162
QRE RVR P PR+ DG
Sbjct: 190 QRERERVRPPLPRSSDG 206
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 26.6 bits (56), Expect = 9.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 328 DEIVHVALRLRELHLVHALAGVP-VQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQ 152
DE + L+L E HL A + V E+LA++ S + E+LL + +EG HL+
Sbjct: 8 DEAASIELQL-EHHLQEQRASLTAVDEALAADPSNADLLEVHEELLAAIKDAEEGLLHLK 66
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -3
Query: 321 SFMLLSASVNSISSMPSPVYQCKKALRLNIAVN 223
S +L S N + S+P + +C+ + L+++ N
Sbjct: 261 SLKILDVSGNKLRSLPDSISKCRSLVELDVSYN 293
>01_03_0075 -
12218501-12218611,12219028-12219267,12219698-12219815,
12219949-12220016,12220124-12220375,12221362-12221463,
12221734-12221802,12221892-12221987,12222161-12222208,
12222352-12222479,12222818-12222896,12223651-12223797,
12223956-12224022,12224655-12224830,12225588-12225755,
12225879-12225992,12226657-12226722,12227306-12227524,
12228142-12228321,12228481-12228584,12228998-12229277,
12230582-12231004
Length = 1084
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 217 RDALEQLLDGGRV-TDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRV 80
R A +++D +V T+E ++ + SAG GLHVV HE RR+
Sbjct: 745 RSAFMKIMDEYKVYTEEEKKQVISAG------GLHVVGTERHESRRI 785
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,007,051
Number of Sequences: 37544
Number of extensions: 177138
Number of successful extensions: 713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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