Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H01
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.42 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.3  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   3.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   5.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   5.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   9.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   9.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 0.42
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 336 YSETRSFMLLSASVNSISSMPSPVYQCKKALR-LNIAVN 223
           + +TR+  +L  S N+I S+P  ++     LR LNI+ N
Sbjct: 167 FGQTRNLEVLDLSTNNIWSLPDHLFCSLSGLRSLNISSN 205


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = -2

Query: 268 GVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV----AHGGLHVVRDP 101
           GVPV   +      EL    LE +      +++    + S G+D+    A   L+V+ DP
Sbjct: 81  GVPVPVRMQGSFPPELASTPLEDI--DSFYSNQRTFVVISKGKDIFRFSATNALYVL-DP 137

Query: 100 FHEVRRVLVLNVKHLLIDFLHRHTTTEDGCLV 5
           F+ +RRV +  + H L   L   TT    C++
Sbjct: 138 FNPIRRVAIYILVHPLFS-LFIITTILVNCIL 168


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 139 DVAHGGLHVVRDPFHEVRRVLVL 71
           D+   GLH+   P H+  R LVL
Sbjct: 411 DLTKKGLHISDIPLHDASRDLVL 433


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 127 GGLHVVRDPFHEVRRV 80
           G +HV+R  FH +R++
Sbjct: 357 GNIHVIRKSFHALRQL 372


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 127 GGLHVVRDPFHEVRRV 80
           G +HV+R  FH +R++
Sbjct: 357 GNIHVIRKSFHALRQL 372


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 261 QCKKALRLNIAVNC 220
           QC KAL L+I + C
Sbjct: 341 QCHKALHLDIGLRC 354


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 290 EFTEAESNMNDLVSEYQQ 343
           E  + E+N+N +VSE Q+
Sbjct: 703 ELKQTEANINSIVSEMQK 720


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,949
Number of Sequences: 2352
Number of extensions: 6332
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)