Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H01
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 234 2e-62
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 234 2e-62
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 233 5e-62
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 233 6e-62
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 231 2e-61
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 230 3e-61
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 137 3e-33
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 137 3e-33
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 84 5e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 81 5e-16
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 80 9e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 80 9e-16
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 80 9e-16
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 80 9e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 79 2e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 78 4e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 78 4e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 78 4e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 78 4e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 78 4e-15
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 76 1e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 70 9e-13
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 59 2e-09
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 29 1.6
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p... 29 1.6
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 29 1.6
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 5.0
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 5.0
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 5.0
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 5.0
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 5.0
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 5.0
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 6.6
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 6.6
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical pr... 27 8.7
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 234 bits (573), Expect = 2e-62
Identities = 110/116 (94%), Positives = 113/116 (97%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGN
Sbjct: 311 LTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
STAIQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 234 bits (573), Expect = 2e-62
Identities = 110/116 (94%), Positives = 113/116 (97%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGN
Sbjct: 311 LTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGN 370
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
STAIQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 233 bits (570), Expect = 5e-62
Identities = 107/113 (94%), Positives = 112/113 (99%)
Frame = +2
Query: 11 AAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTA 190
AA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KMAATF+GNSTA
Sbjct: 314 AAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTA 373
Query: 191 IQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
IQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 233 bits (569), Expect = 6e-62
Identities = 106/113 (93%), Positives = 112/113 (99%)
Frame = +2
Query: 11 AAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTA 190
AA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTA
Sbjct: 314 AAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTA 373
Query: 191 IQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
IQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY+
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 231 bits (564), Expect = 2e-61
Identities = 105/113 (92%), Positives = 112/113 (99%)
Frame = +2
Query: 11 AAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTA 190
AA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTA
Sbjct: 314 AAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTA 373
Query: 191 IQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
IQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY+
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 230 bits (563), Expect = 3e-61
Identities = 105/113 (92%), Positives = 112/113 (99%)
Frame = +2
Query: 11 AAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTA 190
AA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTA
Sbjct: 314 AAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTA 373
Query: 191 IQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYR 349
IQELFK ISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 137 bits (332), Expect = 3e-33
Identities = 64/115 (55%), Positives = 87/115 (75%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI N
Sbjct: 309 LSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIAN 368
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 346
STAIQE K IS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 369 STAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 137 bits (332), Expect = 3e-33
Identities = 64/115 (55%), Positives = 87/115 (75%)
Frame = +2
Query: 2 LHEAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 181
L A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI N
Sbjct: 309 LSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIAN 368
Query: 182 STAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 346
STAIQE K IS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 369 STAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 83.8 bits (198), Expect = 5e-17
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + KE++ + I+ K + FV+W P K + PP L+ A
Sbjct: 318 LYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAIQE + + +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 378 LSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 80.6 bits (190), Expect = 5e-16
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + +++ K S FV+W P K + PP L+ A
Sbjct: 323 LYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCM 382
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 79.8 bits (188), Expect = 9e-16
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 79.8 bits (188), Expect = 9e-16
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 317 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 376
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 377 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 79.8 bits (188), Expect = 9e-16
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 79.8 bits (188), Expect = 9e-16
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 77.8 bits (183), Expect = 4e-15
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATF 172
++RG + K+++ + ++ K + FVEW P K + PP + +
Sbjct: 324 LYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCM 383
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 384 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 77.8 bits (183), Expect = 4e-15
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 77.8 bits (183), Expect = 4e-15
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 77.8 bits (183), Expect = 4e-15
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATF 172
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATF 172
++RG + K+++ + ++ K + FVEW P K + PP + +
Sbjct: 296 LYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCM 355
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
I N+TAI E + + +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 356 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 75.8 bits (178), Expect = 1e-14
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK--------MAATF 172
++RG + K+V + +I+ + S FV+W P K + PP + A
Sbjct: 313 LYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCM 372
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E ++ + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 LSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 69.7 bits (163), Expect = 9e-13
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Frame = +2
Query: 17 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG-----LKMAATF 172
++RG + K+V+ + +++ K FV+W P K + I G + A
Sbjct: 321 LYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCM 380
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ N+TAI E + + +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 381 LSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = +2
Query: 173 IGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 343
+ ++TAI E + + +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 131 CDIPPRGLKMAATFIGNST------AIQELFKCISEQFTAMFRRKAFLHWYT--GEGMDE 286
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 287 MEFTEAESNMNDLVSEY 337
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 131 CDIPPRGLKMAATFIGNST------AIQELFKCISEQFTAMFRRKAFLHWYT--GEGMDE 286
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 287 MEFTEAESNMNDLVSEY 337
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
protein F19F10.11a protein.
Length = 1121
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LKMAATFIGNSTAIQELFKCISEQFTAMFRRK 247
L+MAA G + +L KCIS +FT + +K
Sbjct: 971 LRMAAYISGRESISAQLLKCISYKFTVKYLQK 1002
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 131 CDIPPRGLKMAATFIGNST------AIQELFKCISEQFTAMFRRKAFLHWYT--GEGMDE 286
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 287 MEFTEAESNMNDLVSEY 337
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 43 LHRHT 29
L T
Sbjct: 813 LESMT 817
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 43 LHRHT 29
L T
Sbjct: 811 LESMT 815
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 43 LHRHT 29
L T
Sbjct: 813 LESMT 817
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 43 LHRHT 29
L T
Sbjct: 813 LESMT 817
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 43 LHRHT 29
L T
Sbjct: 811 LESMT 815
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 43 LHRHT 29
L T
Sbjct: 813 LESMT 817
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 155 KMAATFIGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 325
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 326 VSEYQ 340
+ EY+
Sbjct: 428 LDEYK 432
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 223 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 44
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 43 LHRHT 29
L T
Sbjct: 813 LESMT 817
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 155 KMAATFIGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 325
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 326 VSEYQ 340
+ EY+
Sbjct: 428 LDEYK 432
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 262 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 92
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 262 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 92
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 265 VPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSA 146
V Q++L S+ G F + E+++DGG D G L A
Sbjct: 494 VRTQQTLMSKWQGS-FDASCEEMMDGGDAEDRGHGRLNPA 532
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 140 PPRGLKMAATFIGNSTAIQELFKCISEQFTAMFRRKAFLHWYTGEGMDEME 292
P GL + T NST +++ K + ++ +KAF G G+ +E
Sbjct: 7 PVPGLPLLTTLFCNSTTVKKKVKISCDFPDELYTKKAFYGGPIGAGLSAIE 57
>Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical
protein ZK287.7 protein.
Length = 387
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 154 QSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDFLHR 35
+ G AHG + + P H + + +L ++H DF++R
Sbjct: 327 EDVGGHEAHGLVAAAKPPAHFIAMLDLLGLRHAYKDFMNR 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,094,735
Number of Sequences: 27780
Number of extensions: 138802
Number of successful extensions: 521
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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