Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G23
         (444 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   153   8e-38
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   153   8e-38
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   153   8e-38
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    29   2.8  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  153 bits (372), Expect = 8e-38
 Identities = 78/143 (54%), Positives = 93/143 (65%)
 Frame = +1

Query: 13  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 192
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 94  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 153

Query: 193 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXPAEDIFATKKEK 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF                 DIFA KKE+
Sbjct: 154 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTG---EADIFAAKKER 210

Query: 373 YVPSEQRKADQKLVDDAVIKAIR 441
           +VP+EQRK DQK VD A++K I+
Sbjct: 211 FVPNEQRKKDQKEVDAALLKVIK 233


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  153 bits (372), Expect = 8e-38
 Identities = 78/143 (54%), Positives = 93/143 (65%)
 Frame = +1

Query: 13  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 192
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 94  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 153

Query: 193 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXPAEDIFATKKEK 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF                 DIFA KKE+
Sbjct: 154 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTG---EADIFAAKKER 210

Query: 373 YVPSEQRKADQKLVDDAVIKAIR 441
           +VP+EQRK DQK VD A++K I+
Sbjct: 211 FVPNEQRKKDQKEVDAALLKVIK 233


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  153 bits (372), Expect = 8e-38
 Identities = 78/143 (54%), Positives = 93/143 (65%)
 Frame = +1

Query: 13  IRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNA 192
           ++ R    +FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+
Sbjct: 75  VKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNS 134

Query: 193 CPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXPAEDIFATKKEK 372
           CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF                 DIFA KKE+
Sbjct: 135 CPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTG---EADIFAAKKER 191

Query: 373 YVPSEQRKADQKLVDDAVIKAIR 441
           +VP+EQRK DQK VD A++K I+
Sbjct: 192 FVPNEQRKKDQKEVDAALLKVIK 214


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
 Frame = -2

Query: 218 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 81
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,882,582
Number of Sequences: 53049
Number of extensions: 352151
Number of successful extensions: 1114
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)