Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G22
         (253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.15 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   1.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    20   5.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    20   5.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.15
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 32  DVIVG-RVGDKR*DKCGTSI*KIEMYIDYLNVSLSN 136
           D++ G R+G    D C      +EM +D++  S+SN
Sbjct: 160 DIVPGVRIGAHILDDCDNDTYGLEMSVDFIKGSISN 195


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 139 LMKTSNKNGLLIVCLPVQFNF*LCHDRLYQLYTIQ 243
           +  T  KN    + +PV ++  L HD     Y  Q
Sbjct: 180 IQNTQGKNNQQNILIPVNYSALLSHDEQQLSYFTQ 214


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 INKPFLLDVFINCLI 129
           +N   LL+ ++NCL+
Sbjct: 37  LNTERLLNAYVNCLL 51


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 INKPFLLDVFINCLI 129
           +N   LL+ ++NCL+
Sbjct: 37  LNTERLLNAYVNCLL 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,227
Number of Sequences: 438
Number of extensions: 942
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)