Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G21
         (214 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    65   6e-12
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    65   6e-12
AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical ...    54   2e-08
Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z92813-1|CAB07286.1|  393|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z82285-6|CAB05299.1|  252|Caenorhabditis elegans Hypothetical pr...    25   7.3  
U41538-4|AAG00011.1|  175|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 65.3 bits (152), Expect = 6e-12
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = +1

Query: 25  EYDAQARDAGVYIISACGFDSIPNDMGVVFLKQHFGGTLNSVESYL 162
           +Y  QA++ GVY++SACG+DSIP D+GV FLK++F G LN VES++
Sbjct: 126 KYSKQAKEQGVYVVSACGWDSIPADLGVNFLKKNFHGDLNHVESFV 171


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 65.3 bits (152), Expect = 6e-12
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = +1

Query: 25  EYDAQARDAGVYIISACGFDSIPNDMGVVFLKQHFGGTLNSVESYL 162
           +Y  QA++ GVY++SACG+DSIP D+GV FLK++F G LN VES++
Sbjct: 126 KYSKQAKEQGVYVVSACGWDSIPADLGVNFLKKNFHGDLNHVESFV 171


>AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical
           protein F22F7.2 protein.
          Length = 422

 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 22/46 (47%), Positives = 33/46 (71%)
 Frame = +1

Query: 25  EYDAQARDAGVYIISACGFDSIPNDMGVVFLKQHFGGTLNSVESYL 162
           +Y   A++  VYI+SACG+DSIP D GV  LK++F G L  ++++L
Sbjct: 128 KYGQMAKNNNVYIVSACGWDSIPADFGVKLLKRYFDGHLQRIDAFL 173


>Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical
           protein C27H6.3 protein.
          Length = 660

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -2

Query: 150 NRVQSSSKVLFEEYDAHIIGDTVEATRANDVDAGVT 43
           +++ S  + LFE+ D+ +  D ++ +   DVD+G++
Sbjct: 99  DQMNSRIEGLFEDLDSSVEPDIIDRSELEDVDSGIS 134


>Z92813-1|CAB07286.1|  393|Caenorhabditis elegans Hypothetical
           protein T28A8.1 protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -2

Query: 174 HVRTQV*LNRVQSSSKVLFEEYDAHIIGDTVEATRANDVDAGVTRLRVVF 25
           HV   + +  V + +++LFE +D H IG         D D   T +  +F
Sbjct: 73  HVVEDLAVKYVDNVTRILFEAFDTHCIGAKHLRPGGEDEDYNWTYMTALF 122


>AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical
           protein F33D4.4 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 100 MGVVFLKQHFGGTLNSVESYLSTDMPTELTAEAAKS 207
           M + F K H     N  E  + TD+PTE  A+  ++
Sbjct: 121 MSISFKKYHLEHHRNLGEDVIDTDVPTEFEAKVFRT 156


>Z82285-6|CAB05299.1|  252|Caenorhabditis elegans Hypothetical
           protein T28F3.6 protein.
          Length = 252

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +1

Query: 76  GFDSIPNDMGVVFLKQHFGGTLNSVESYLSTDMPTELTAEAAKSGT 213
           GF+ +P   GV  +  HFG     V+  +++ M + L  +  + G+
Sbjct: 191 GFEILPKLRGVHHVAHHFGSEAMQVKMEVNSFMASVLKMDQRQMGS 236


>U41538-4|AAG00011.1|  175|Caenorhabditis elegans Hypothetical
           protein R04E5.9 protein.
          Length = 175

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 123 LFEEYDAHIIGD 88
           +FEE DAH++GD
Sbjct: 11  IFEEEDAHVLGD 22


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,004,131
Number of Sequences: 27780
Number of extensions: 58269
Number of successful extensions: 173
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 12,740,198
effective HSP length: 50
effective length of database: 11,351,198
effective search space used: 227023960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)