Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G19
(426 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 166 1e-42
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 165 2e-42
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 165 2e-42
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 90 1e-19
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 86 2e-18
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 63 2e-11
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 2e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 36 0.002
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.075
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 31 0.075
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.13
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.23
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.30
SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|... 28 0.53
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.70
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.70
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.6
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 2.8
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 25 3.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 3.7
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 4.9
SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.9
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 4.9
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 6.5
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.5
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 24 8.6
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 24 8.6
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 24 8.6
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 24 8.6
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 24 8.6
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 166 bits (403), Expect = 1e-42
Identities = 88/132 (66%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSH--TLRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEA + + + AWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISK+GQ
Sbjct: 121 GEFEAGISKDGQ 132
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 165 bits (402), Expect = 2e-42
Identities = 87/132 (65%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSH--TLRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEA + + + AWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISK+GQ
Sbjct: 121 GEFEAGISKDGQ 132
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 165 bits (402), Expect = 2e-42
Identities = 87/132 (65%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSH--TLRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEA + + + AWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISK+GQ
Sbjct: 121 GEFEAGISKDGQ 132
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 90.2 bits (214), Expect = 1e-19
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Frame = +1
Query: 49 GKKGSHTLRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVLDKL 219
GK+ + + IGHV + ++ +R +EK E+EA++ + ++W LD
Sbjct: 235 GKEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDST 294
Query: 220 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 399
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEF
Sbjct: 295 SEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEF 354
Query: 400 EAGISKNGQ 426
EAG + GQ
Sbjct: 355 EAGFERGGQ 363
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 85.8 bits (203), Expect = 2e-18
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +1
Query: 142 RXIEKFEKEAQKWVR-FLQIAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 318
R ++K EA + AW+LD + ER RG+T+D+A FE+ K I DAPGHR
Sbjct: 207 RSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHR 266
Query: 319 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
DFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 267 DFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 63.3 bits (147), Expect = 2e-11
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+DK E+ RGITI A ++ET + +D PGH D+IKNMITG + D A+++V+A
Sbjct: 91 IDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSAT 150
Query: 388 TGE 396
G+
Sbjct: 151 DGQ 153
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 48.0 bits (109), Expect = 6e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 205 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 384
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 385 GTG 393
G
Sbjct: 127 SAG 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 43.2 bits (97), Expect = 2e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 208 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 376 VAAGTG 393
V A G
Sbjct: 155 VDASQG 160
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 36.3 bits (80), Expect = 0.002
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 238 GITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
GIT I + F+ G ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.075
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 31.1 bits (67), Expect = 0.075
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
Y + IID PGH DF + D AVL++ A +G
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSG 181
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.13
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.23
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.30
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 211 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 333
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 28.3 bits (60), Expect = 0.53
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +1
Query: 64 HTLRIGHVTRQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVRFLQIAWVLDKLKAERERGI 243
+T++ G V + + + +D RW RQR +E E + + + V KL +
Sbjct: 27 NTIKRGKVPQHIA-FVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLKLGVKEVSAF 85
Query: 244 TIDIALWKFETGKYYVTII 300
T I F+ KY V ++
Sbjct: 86 TFSIE--NFKRSKYEVDML 102
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.70
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.70
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 298 IDAPGHRDFIKNMITGTSQADCAVLIV 378
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
Score = 25.0 bits (52), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 187 TLPISGLPSRTFRWXVVDTTAFVDQVTSV 101
TL +S + +TF + +DT VD V V
Sbjct: 198 TLAVSDMKGKTFAFQCIDTPGHVDFVDEV 226
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 2.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1
Query: 369 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 262
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 3.7
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 220 KAERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 342
K E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 16 KYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 399 EFTSTSGDNKHGAVSLRRSSDHVLDE 322
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 4.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 372 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 259
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 25.0 bits (52), Expect = 4.9
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 53 RKVHIHCASDTSLGK-SHTGHLIYKCGGIDNVPSKSSRRKPRNG*GSFKSLGYWT 214
++VH S T+ + T +L + CGG N P+ ++ + S+ G WT
Sbjct: 105 KEVHFTDMSGTTWSADTFTENLYWFCGGDGNKPNMTTAAAMNSDIDSYYVYGNWT 159
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 4.9
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 243 HHRY-CSLEVRNRQILCHHH 299
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 24.6 bits (51), Expect = 6.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -3
Query: 190 GTLPISGLPSRTFRWXVVDTTAFVDQVTSV*LAE*RVRCAMYVNLSCPFW*SDTISGI 17
GT+PIS LP+ F + ++Q L + RV + N F SD + +
Sbjct: 344 GTIPISVLPTSNFSAATPANPSLINQNGQEFLQQSRVLYLFHANKQRHFELSDILGNV 401
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 24.6 bits (51), Expect = 6.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 154 KFEKEAQKWVRFLQIAWVLDKLKAERERGIT 246
K + +KW+ +++I L LKA G+T
Sbjct: 353 KHNQHNEKWISWIRIPKFLGFLKASENTGLT 383
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 24.2 bits (50), Expect = 8.6
Identities = 9/45 (20%), Positives = 23/45 (51%)
Frame = +1
Query: 103 HWSLDLQMRWYRQRXIEKFEKEAQKWVRFLQIAWVLDKLKAERER 237
HW ++ W + ++EKE+ ++ +++ +D+L +R
Sbjct: 425 HWHSEVPESWPSPDQLREYEKESWEY-HIVKLCKAMDELSTSEKR 468
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 148 IEKFEKEAQKWVRFLQIAWVLDKLKAERERGITIDIALWKFETGKYYVT 294
+ +E+E +KW FLQI VL + +E+ R + D L + K+ T
Sbjct: 616 VANWERELKKWAPFLQIN-VL--VGSEKNRSLVRDYRLINQKDPKHVST 661
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 24.2 bits (50), Expect = 8.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 104 TGHLIYKCGGIDNVPSKSSRRK 169
T +L+ KC G+D +P +S + +
Sbjct: 413 TRNLLEKCNGLDLLPERSHKHR 434
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 8.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 309 WTQRFHQEHDHWN 347
W Q F Q+H +WN
Sbjct: 258 WQQSFLQDHGYWN 270
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 24.2 bits (50), Expect = 8.6
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = +1
Query: 121 QMRWYRQRXIEKFEKEAQKWVRFLQIAWVLDK 216
Q+ +R++ + ++A+ W R + ++LDK
Sbjct: 285 QLNLHRKQSTDVEPEKAESWKRIFWMCYILDK 316
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,848,612
Number of Sequences: 5004
Number of extensions: 37870
Number of successful extensions: 144
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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