Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G19
(426 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 110 5e-25
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 93 1e-19
SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 79 2e-15
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 42 3e-04
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 36 0.019
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 35 0.032
SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.075
SB_13112| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26) 31 0.53
SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07) 30 0.70
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 0.92
SB_22267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0) 29 2.1
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 28 2.8
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 28 2.8
SB_39597| Best HMM Match : 7tm_2 (HMM E-Value=2.9e-13) 27 4.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 6.5
SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 27 6.5
SB_42711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_14231| Best HMM Match : RVT_1 (HMM E-Value=0.00045) 27 8.6
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 8.6
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 27 8.6
SB_17748| Best HMM Match : DUF1312 (HMM E-Value=0.0024) 27 8.6
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 110 bits (264), Expect = 5e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +1
Query: 199 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQ 354
AWVLDKLKAERERGITIDIALWKFET KYYVT+IDAPGHRDFIKNMITGTSQ
Sbjct: 9 AWVLDKLKAERERGITIDIALWKFETLKYYVTVIDAPGHRDFIKNMITGTSQ 60
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 92.7 bits (220), Expect = 1e-19
Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +1
Query: 139 QRXIEKFEKEAQKWVRFL-QIAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGH 315
+R +EK+E+EA++ R ++W LD + ER++G T+++ F+T + T++DAPGH
Sbjct: 173 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTVEVGRAAFDTDTKHFTLLDAPGH 232
Query: 316 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
+ F+ NMI+G +QAD VL+++A GEFE G + GQ
Sbjct: 233 KSFVPNMISGATQADLGVLVISARKGEFETGFERGGQ 269
>SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09)
Length = 123
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +1
Query: 247 IDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
+D+ L +F+T +T++DAPGH+DFI NMITG +QAD A+L+V A TGEFEAG GQ
Sbjct: 1 MDVGLTRFQTKNKVITLMDAPGHKDFIPNMITGAAQADVAILVVDAITGEFEAGFESGGQ 60
>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 359
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
D ++ ER+RGI++ ++ F + I+D PGH+DF ++ + D ++++
Sbjct: 55 DFMEIERQRGISVATSVLAFNYRDKKINILDTPGHKDFAEDTFRTLTAVDSVIVVIDVAK 114
Query: 391 G 393
G
Sbjct: 115 G 115
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 38 LPKWARKVHIHCASDTSLGKSHT-GHLIYKCGGID 139
+PK ++I GKS T GHLIYKCGGID
Sbjct: 1 MPKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGID 35
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 76 IGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVRFLQIAWVLDKLKAE 228
IGHV + T L + +R IEKFEKE+ + + F + KLK E
Sbjct: 13 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEVLCFSSCLLFMSKLKFE 65
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 34.7 bits (76), Expect = 0.032
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 238 GITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 384
GIT I + + G + +D PGH F G D +++VAA
Sbjct: 123 GITQHIGAYSVKVGDQKIAFLDTPGHEAFTAMRARGAQVTDLVIIVVAA 171
>SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 33.5 bits (73), Expect = 0.075
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 238 GITIDIA--LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
GIT I L K +G+ +T ID PGH F G + D VL+VAA G
Sbjct: 60 GITQHIGAFLVKLPSGEK-ITFIDTPGHAAFNSMRARGANVTDIVVLVVAADDG 112
>SB_13112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 31.9 bits (69), Expect = 0.23
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 206 TQAI*RNLTHFWASFSNFSMXRCRYHRICRSSDQCVTCRVTCPMRNVCEPFLPILVVRYN 27
T+ + R +T + + + N + R + R +CVTC VT + +L V RY
Sbjct: 106 TRCLTRYVTRYMSRYVNRYVTRYVARYVTRYVTRCVTCYVTRYVTRYVTRYLTRYVTRYV 165
Query: 26 QRYI 15
RY+
Sbjct: 166 TRYV 169
>SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26)
Length = 541
Score = 30.7 bits (66), Expect = 0.53
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 214 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
+ K E ER ITI + Y +D PGH + M+ G + D A+L++A
Sbjct: 49 RFKNELERNITIKLG--------YANAKVDCPGHDILMATMLNGAAVMDAALLLIA 96
>SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07)
Length = 203
Score = 30.3 bits (65), Expect = 0.70
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Frame = +1
Query: 211 DKLKAERERGITIDIALWKFET---------GKYY----VTIIDAPGHRDFIKNMITGTS 351
DK +ERGIT+D+ F+ G + +T++D PGH IK +I G
Sbjct: 65 DKNPQSQERGITLDLGFSSFQVALPEHLRSAGSEHDLLQMTLVDCPGHASLIKTIIGG-- 122
Query: 352 QADCAVLIVAAGTGEFEAGISKNGQ 426
A +I GT E G ++G+
Sbjct: 123 ----AQIIGECGT--IEGGFGQSGK 141
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 29.9 bits (64), Expect = 0.92
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
IID PGH F G+S D A+L+V
Sbjct: 682 IIDTPGHESFSNLRSRGSSLCDMAILVV 709
>SB_22267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 227 SAFSLSNTQAI*RNLTHFWA---SFSNFSMXRCRYHRICRSS 111
++FSL + A+ + TH+W SFS F + R+H +CR +
Sbjct: 61 ASFSL-RSNALPLSYTHWWLNNWSFSKFYTDKMRHHTLCRGN 101
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 205 VLDKLKAERERGITI 249
VLDKL+ ERERGIT+
Sbjct: 1977 VLDKLQVERERGITV 1991
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 128 RICRSSDQCVTCRVTCPMRNVC 63
RICR D+C+T C + VC
Sbjct: 1387 RICRDIDECLTSSPNCTEKEVC 1408
>SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 687
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 374 ISTAQSA*DVPVIMFLMKSLCPGASMMVT*YLPVSNFQRAISMVI 240
I QSA DV ++ L L G + ++ +LP SNF + V+
Sbjct: 331 IPLIQSAKDVRILAVLAMLLTIGLAFLIVPFLPASNFFFRVGFVV 375
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ + +ID+PGH DF + D A+++V +G
Sbjct: 99 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 135
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.3 bits (60), Expect = 2.8
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 147 HRKVREGSPEMGKVP-SNRLGIGQTKGRA*AWYHHRYCSLEVRNRQILCH--HHRRSWTQ 317
H V P GK+ S L Q K + +HHRYC + V H HHRR +
Sbjct: 58 HVMVNVSQPSGGKLCFSFELSGFQGKNVSSFDHHHRYCIIIVTVSWSFDHHNHHRR---R 114
Query: 318 RFHQEH 335
R HQ H
Sbjct: 115 RRHQHH 120
>SB_39597| Best HMM Match : 7tm_2 (HMM E-Value=2.9e-13)
Length = 1052
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 101 VTCRVTCPMRNVCEPFLPI 45
VT +VTCP+R+ +P+L I
Sbjct: 498 VTTQVTCPLRSYYDPYLEI 516
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 128 RICRSSDQCVTCRVTCPMRNVCEPFLPILVVRYNQRYIRDTR 3
R C D+C T +V C VC L + + Y RD++
Sbjct: 454 RTCADVDECKTGQVKCGENEVCANSLGSFTCQCAEGYERDSQ 495
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 291 HHHRRSWTQRFHQEHDH 341
HHHRR +R H H H
Sbjct: 238 HHHRRRRRRRHHHHHHH 254
>SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.1 bits (57), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 247 W*YHAHARPLVCPIP 203
W +H H+RP+ PIP
Sbjct: 130 WQFHQHSRPMAVPIP 144
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 107 QCVTCRVTCPMRNVCE 60
QC T VTCP R C+
Sbjct: 257 QCTTANVTCPPRKCCD 272
>SB_42711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 920
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 27 IVSDYQNGQERFTYIAHRTR 86
+V+DY N E F Y+AH R
Sbjct: 231 LVTDYANNGEMFDYLAHHGR 250
>SB_14231| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
Length = 519
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -1
Query: 303 VDDGDIVFAGFELPESNIDGDTTLTLGL*FVQYPSDL----KEPYPFLGFLLELFDGTLS 136
+DD ++ G+EL N+ TL L FV +P + +GF+L+ T+S
Sbjct: 368 IDDSYLLADGYELCVENVIDTLTLFNKLGFVVHPEKSVLVHTQKLVLIGFILDSTSMTVS 427
Query: 135 IPP 127
+ P
Sbjct: 428 LTP 430
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 140 CRYHRICRSSDQCVTCRVTCPMRNVCEP 57
CRYH C + + CR CP + C P
Sbjct: 670 CRYHAKCLYTGSTLECR--CPSESDCLP 695
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 390 STSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNIDGD 241
S D +G+ SD D VS +DGD V G ++ + +IDGD
Sbjct: 68 SDGDDVSNGSSDGDDVSDGSSDGDDVSDGSNDGDDVSDGDDVSDGSIDGD 117
>SB_17748| Best HMM Match : DUF1312 (HMM E-Value=0.0024)
Length = 1272
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 185 LTHFWASFSNFSMXRCRYHRICRSS 111
L +FW SF R YH CR S
Sbjct: 34 LGYFWGSFRVLGSFRVLYHDACRHS 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,172,668
Number of Sequences: 59808
Number of extensions: 311322
Number of successful extensions: 1034
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 814166562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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