Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G19
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 175 8e-45
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 8e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 8e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 6e-36
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 97 5e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 68 2e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 68 2e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 64 3e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 64 3e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 64 3e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 9e-07
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 40 0.001
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 0.007
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 33 0.065
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 33 0.065
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 33 0.065
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.20
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.46
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.80
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.80
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.80
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 3.2
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 3.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 4.3
U41030-5|AAM51527.1| 132|Caenorhabditis elegans Hypothetical pr... 27 7.4
U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 7.4
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 9.8
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 26 9.8
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 9.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 175 bits (427), Expect = 8e-45
Identities = 92/132 (69%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSHT--LRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEAQ+ + + AWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISKNGQ
Sbjct: 121 GEFEAGISKNGQ 132
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (427), Expect = 8e-45
Identities = 92/132 (69%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSHT--LRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEAQ+ + + AWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISKNGQ
Sbjct: 121 GEFEAGISKNGQ 132
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (427), Expect = 8e-45
Identities = 92/132 (69%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Frame = +1
Query: 46 MGKKGSHT--LRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEAQ+ + + AWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 390
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 391 GEFEAGISKNGQ 426
GEFEAGISKNGQ
Sbjct: 121 GEFEAGISKNGQ 132
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (354), Expect = 6e-36
Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 5/117 (4%)
Frame = +1
Query: 46 MGKKGSHT--LRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEAQ+ + + AWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 109 bits (261), Expect = 1e-24
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +1
Query: 142 RXIEKFEKEAQKWVRF-LQIAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 318
R I+KF+ EA + + AWVLD+ + ERERG+T+DI FET + ++DAPGH+
Sbjct: 200 RTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHK 259
Query: 319 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
DFI NMITGTSQAD A+L+V A TGEFE G GQ
Sbjct: 260 DFISNMITGTSQADAAILVVNATTGEFETGFENGGQ 295
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 109 bits (261), Expect = 1e-24
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +1
Query: 142 RXIEKFEKEAQKWVRF-LQIAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHR 318
R I+KF+ EA + + AWVLD+ + ERERG+T+DI FET + ++DAPGH+
Sbjct: 218 RTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHK 277
Query: 319 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
DFI NMITGTSQAD A+L+V A TGEFE G GQ
Sbjct: 278 DFISNMITGTSQADAAILVVNATTGEFETGFENGGQ 313
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 97.1 bits (231), Expect = 5e-21
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +1
Query: 139 QRXIEKFEKEA-QKWVRFLQIAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGH 315
+R +EK+E+EA +K ++W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 138 KRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 316 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 426
+ F+ NMI G +QAD AVL+++A GEFE G + GQ
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQ 234
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 388 TGEFE 402
G E
Sbjct: 143 DGVME 147
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.1 bits (159), Expect = 2e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 388 TGEFE 402
G E
Sbjct: 143 DGVME 147
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.5 bits (150), Expect = 3e-11
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 388 TG 393
G
Sbjct: 147 DG 148
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.5 bits (150), Expect = 3e-11
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 388 TG 393
G
Sbjct: 148 DG 149
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.5 bits (150), Expect = 3e-11
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 388 TG 393
G
Sbjct: 148 DG 149
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 49.6 bits (113), Expect = 9e-07
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 205 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 384
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 385 GTG 393
G
Sbjct: 136 NQG 138
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +1
Query: 46 MGKKGSHT--LRIGHVT--RQVTHWSLDLQMRWYRQRXIEKFEKEAQKWVR-FLQIAWVL 210
MGK+ H + IGHV + T L + +R IEKFEKEAQ+ + + AWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 211 DKLKAER 231
DKLK +
Sbjct: 61 DKLKVTK 67
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/51 (49%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 56 KVHIHCA--SDTSLGKSHT-GHLIYKCGGID-NVPSKSSRRKPRNG*GSFK 196
KVHI+ GKS T GHLIYKCGGID K + G GSFK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFK 55
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 205 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 384
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 385 GTG 393
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 387
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 388 TG 393
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 238 GITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
GIT I + E K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 118 LQMRWYRQRXIEK--FEKEAQKWVRFLQIAWVLDKLKAERERGITIDIALWKFETGKYYV 291
+ +WY Q + + + +FL W+++KL R +T W ++ G YV
Sbjct: 1413 MDSKWYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYV 1472
Query: 292 TII 300
T I
Sbjct: 1473 TTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 118 LQMRWYRQRXIEK--FEKEAQKWVRFLQIAWVLDKLKAERERGITIDIALWKFETGKYYV 291
+ +WY Q + + + +FL W+++KL R +T W ++ G YV
Sbjct: 1413 MDSKWYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYV 1472
Query: 292 TII 300
T I
Sbjct: 1473 TTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 118 LQMRWYRQRXIEK--FEKEAQKWVRFLQIAWVLDKLKAERERGITIDIALWKFETGKYYV 291
+ +WY Q + + + +FL W+++KL R +T W ++ G YV
Sbjct: 1413 MDSKWYTQNSMRLMFYNGDVDTICQFLGDQWLIEKLVTRRNLTVTSPRQPWYYQQGSQYV 1472
Query: 292 TII 300
T I
Sbjct: 1473 TTI 1475
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 208 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.20
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 211 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 376 VAAGTG 393
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.20
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 211 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 375
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 376 VAAGTG 393
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.46
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 381
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.80
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 309 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 220
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 0.80
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 244 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.80
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 244 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 262 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 384
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 378 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 247
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 378 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 247
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 378 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 247
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 378 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 247
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>U41030-5|AAM51527.1| 132|Caenorhabditis elegans Hypothetical
protein C44C1.4b protein.
Length = 132
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 330 LDEISVSRSVDDGDIVFAGFELPESNIDGDTTLTLGL*FVQYPSDLKEPYPF 175
+D + SR + I AG ++ +DG+TT T+ F Q KE Y F
Sbjct: 1 MDLVQSSRKLIQDMIQLAGSQMKLLLMDGETTPTVSCAFAQSEVMQKEVYIF 52
>U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical
protein C44C1.4a protein.
Length = 547
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 330 LDEISVSRSVDDGDIVFAGFELPESNIDGDTTLTLGL*FVQYPSDLKEPYPF 175
+D + SR + I AG ++ +DG+TT T+ F Q KE Y F
Sbjct: 1 MDLVQSSRKLIQDMIQLAGSQMKLLLMDGETTPTVSCAFAQSEVMQKEVYIF 52
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 405 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 274
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 240 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 341
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 103 HWSLDLQMRWYRQRXIEKFEKEAQK 177
HW + Q RW RQ + E+EA++
Sbjct: 231 HWYMAFQRRWERQLLKLEIEREAKQ 255
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 240 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 341
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,335,467
Number of Sequences: 27780
Number of extensions: 219299
Number of successful extensions: 862
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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