Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G17
(264 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001377-1|AAN71132.1| 248|Drosophila melanogaster GH01987p pro... 26 8.3
AY121677-1|AAM52004.1| 507|Drosophila melanogaster RE27528p pro... 26 8.3
AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p pro... 26 8.3
AF216663-1|AAF32293.1| 2263|Drosophila melanogaster guanine-nucl... 26 8.3
AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family g... 26 8.3
AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE... 26 8.3
AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF... 26 8.3
AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB... 26 8.3
AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD... 26 8.3
AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC... 26 8.3
AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA... 26 8.3
AE014134-3342|AAF53963.1| 507|Drosophila melanogaster CG9253-PA... 26 8.3
AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein. 26 8.3
>BT001377-1|AAN71132.1| 248|Drosophila melanogaster GH01987p
protein.
Length = 248
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 76 NPLSEIEEIVKTTTEQHESNSRV 98
>AY121677-1|AAM52004.1| 507|Drosophila melanogaster RE27528p
protein.
Length = 507
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 165 NEYSGRSFMVFCS 203
NE +G SFM+FCS
Sbjct: 296 NELAGNSFMIFCS 308
>AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p
protein.
Length = 654
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 273 NPLSEIEEIVKTTTEQHESNSRV 295
>AF216663-1|AAF32293.1| 2263|Drosophila melanogaster
guanine-nucleotide-exchange-factorTRIO protein.
Length = 2263
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 1882 NPLSEIEEIVKTTTEQHESNSRV 1904
>AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family
guanine nucleotideexchange factor Trio protein.
Length = 2263
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 1882 NPLSEIEEIVKTTTEQHESNSRV 1904
>AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE,
isoform E protein.
Length = 398
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 17 NPLSEIEEIVKTTTEQHESNSRV 39
>AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF,
isoform F protein.
Length = 658
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 277 NPLSEIEEIVKTTTEQHESNSRV 299
>AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB,
isoform B protein.
Length = 658
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 277 NPLSEIEEIVKTTTEQHESNSRV 299
>AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD,
isoform D protein.
Length = 804
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 423 NPLSEIEEIVKTTTEQHESNSRV 445
>AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC,
isoform C protein.
Length = 2263
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 1882 NPLSEIEEIVKTTTEQHESNSRV 1904
>AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA,
isoform A protein.
Length = 2263
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 1882 NPLSEIEEIVKTTTEQHESNSRV 1904
>AE014134-3342|AAF53963.1| 507|Drosophila melanogaster CG9253-PA
protein.
Length = 507
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 165 NEYSGRSFMVFCS 203
NE +G SFM+FCS
Sbjct: 296 NELAGNSFMIFCS 308
>AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.
Length = 2263
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 239 NPYKREEENVRHTTKHHEATTRI 171
NP EE V+ TT+ HE+ +R+
Sbjct: 1882 NPLSEIEEIVKTTTEQHESNSRV 1904
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,589,437
Number of Sequences: 53049
Number of extensions: 193618
Number of successful extensions: 513
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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