Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G15
         (492 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   168   4e-42
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   168   4e-42
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   168   4e-42
AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 prot...    30   1.5  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  168 bits (408), Expect = 4e-42
 Identities = 88/159 (55%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
 Frame = +2

Query: 17  FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 196
           FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+CPLRR+ QR
Sbjct: 103 FSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQR 162

Query: 197 YVILTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRK 373
           YVI TS+KVDLG FK+P HL+DAYF               GE DIFA KKE++VP+EQRK
Sbjct: 163 YVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRK 218

Query: 374 ADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFP 490
            DQK VD A++K I+  P+ K    YL+  F L SSQ+P
Sbjct: 219 KDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 257


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  168 bits (408), Expect = 4e-42
 Identities = 88/159 (55%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
 Frame = +2

Query: 17  FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 196
           FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+CPLRR+ QR
Sbjct: 103 FSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQR 162

Query: 197 YVILTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRK 373
           YVI TS+KVDLG FK+P HL+DAYF               GE DIFA KKE++VP+EQRK
Sbjct: 163 YVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRK 218

Query: 374 ADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFP 490
            DQK VD A++K I+  P+ K    YL+  F L SSQ+P
Sbjct: 219 KDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 257


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  168 bits (408), Expect = 4e-42
 Identities = 88/159 (55%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
 Frame = +2

Query: 17  FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 196
           FS+H R TR NLTPGTV ILLAGRH GKR              TGPFA N+CPLRR+ QR
Sbjct: 84  FSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQR 143

Query: 197 YVILTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQGE-DIFATKKEKYVPSEQRK 373
           YVI TS+KVDLG FK+P HL+DAYF               GE DIFA KKE++VP+EQRK
Sbjct: 144 YVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKTGEADIFAAKKERFVPNEQRK 199

Query: 374 ADQKLVDEAVIKAIRLRPDKKTLRGYLRASFGLRSSQFP 490
            DQK VD A++K I+  P+ K    YL+  F L SSQ+P
Sbjct: 200 KDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 238


>AF199369-2|AAF09580.1|  318|Drosophila melanogaster MEI-P22 protein
           protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = -1

Query: 195 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVPGVRLGLVL 34
           +C   +RG   K K P K      S+  LGNTP S ++LPA  PA+ +H +P     + L
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLPPAAPAMQL 205

Query: 33  RTCLLKP 13
               L P
Sbjct: 206 SDLSLTP 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,029,603
Number of Sequences: 53049
Number of extensions: 364197
Number of successful extensions: 1159
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)