Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G13
(361 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 187 3e-48
03_01_0547 + 4093196-4093657,4094267-4095148 187 3e-48
03_01_0544 + 4082528-4082989,4083585-4084466 187 3e-48
03_01_0543 + 4076981-4077442,4078145-4079026 187 3e-48
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 108 1e-24
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 108 1e-24
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 70 6e-13
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 66 8e-12
02_04_0462 + 23131433-23132836 54 3e-08
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 52 1e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 51 3e-07
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 46 7e-06
03_05_0511 + 25056018-25059107 44 4e-05
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 42 1e-04
02_04_0148 - 20198407-20201424 42 1e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 42 2e-04
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 37 0.004
04_01_0103 + 1082077-1082167,1083037-1085477 37 0.005
02_04_0017 + 18937774-18937864,18938505-18940945 37 0.005
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 36 0.010
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 35 0.017
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 32 0.12
01_06_0662 + 30987187-30987277,30987825-30990214 32 0.12
12_02_1045 + 25656495-25656566,25657788-25657884,25658327-256584... 27 3.4
05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320 27 4.4
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 4.4
07_03_0576 + 19638725-19638779,19638988-19639144,19639871-196401... 27 5.9
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 26 7.7
03_05_0341 + 23300588-23300710,23300958-23301363,23301463-233016... 26 7.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 187 bits (455), Expect = 3e-48
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEK+A E+ K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 99
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 187 bits (455), Expect = 3e-48
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEK+A E+ K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 99
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 187 bits (455), Expect = 3e-48
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEK+A E+ K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 99
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 187 bits (455), Expect = 3e-48
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEK+A E+ K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 99
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 108 bits (260), Expect = 1e-24
Identities = 45/92 (48%), Positives = 68/92 (73%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAER 265
+N+ ++GHVDSGKST +G L++ G I ++ + K EK+A+E KGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 266 ERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
ERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 108 bits (260), Expect = 1e-24
Identities = 45/92 (48%), Positives = 68/92 (73%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAER 265
+N+ ++GHVDSGKST +G L++ G I ++ + K EK+A+E KGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 266 ERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
ERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 69.7 bits (163), Expect = 6e-13
Identities = 32/87 (36%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Frame = +2
Query: 113 DSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERERGITIDIA 292
D+GKST G +++ G +D+RTI+K+EK+A++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 293 LWKFETGKYYVTIIDAP----GHRDFI 361
FET TI+DAP GH+ ++
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYV 90
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 66.1 bits (154), Expect = 8e-12
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +2
Query: 209 IFKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
I KGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFV 326
>02_04_0462 + 23131433-23132836
Length = 467
Score = 54.0 bits (124), Expect = 3e-08
Identities = 32/100 (32%), Positives = 48/100 (48%)
Frame = +2
Query: 62 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWV 241
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 242 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
+D ER RGITI+ A ++ET + +D PGH D++
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYV 147
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 52.4 bits (120), Expect = 1e-07
Identities = 34/90 (37%), Positives = 44/90 (48%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
NI + H+DSGK+T T ++Y G I E E+ +G +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIHE---------IHEV-RGRDGVGAKMDSMDLERE 119
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+GITI A Y V IID PGH DF
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDF 149
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 50.8 bits (116), Expect = 3e-07
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = +2
Query: 71 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDK 250
+ K H+N+ IGHVD GK+T T I K +A + +F +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTA------------AITKVLAEAGKAKAVAFDE---IDK 107
Query: 251 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E+ RGITI A ++ET K + +D PGH D++
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYV 144
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 46.4 bits (105), Expect = 7e-06
Identities = 32/92 (34%), Positives = 49/92 (53%)
Frame = +2
Query: 83 HINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAE 262
HI+ V++ H+D+GK+TTT ++Y G I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG--RNYKIGEFQ-------EGTVTMDW----MEQE 150
Query: 263 RERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ERGITI K+ + IID PGH DF
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDF 182
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 44.0 bits (99), Expect = 4e-05
Identities = 28/90 (31%), Positives = 41/90 (45%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
R IT+ A G + V +ID+PGH DF
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDF 88
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
RGITI + + + ++D PGH DF
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADF 136
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 41.9 bits (94), Expect = 1e-04
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 269 RGITI---DIALWK--FETGKYYVTIIDAPGHRDF 358
R IT+ IAL + + G + V +ID+PGH DF
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDF 100
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 41.5 bits (93), Expect = 2e-04
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N +I H+D GKST L+ G T++K E Q LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTG-----TVQKREMKQQ-----------FLDNMDLERE 122
Query: 269 RGITIDIAL----WKFETGKYYVTIIDAPGHRDF 358
RGITI + + Y + +ID PGH DF
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDF 156
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/90 (31%), Positives = 40/90 (44%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
NI ++ HVD GK+T ++ + K +D Q + + ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVVQER------IMDSNDLERE 165
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
RGITI + IID PGH DF
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDF 195
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 36.7 bits (81), Expect = 0.005
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IEKFEKDAQEIFKG-SFKY 232
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 233 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ + E ++ + + + +Y + +ID+PGH DF
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDF 111
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 36.7 bits (81), Expect = 0.005
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IEKFEKDAQEIFKG-SFKY 232
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 233 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ + E ++ + + + +Y + +ID+PGH DF
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDF 111
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 35.9 bits (79), Expect = 0.010
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N+ VI HVD GKST T L+ G I AQ++ G + + D E E
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGII-----------AQDV-AGDVR---MTDTRADEAE 65
Query: 269 RGITI------------DIALWKFE----TGKYYVTIIDAPGHRDF 358
RGITI D AL FE Y + +ID+PGH DF
Sbjct: 66 RGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDF 111
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 35.1 bits (77), Expect = 0.017
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 15/105 (14%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N +I HVD GKST L+ G TI+K Q LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTG-----TIKKGHGQPQ-----------YLDKLQVERE 102
Query: 269 RGITIDI---------------ALWKFETGKYYVTIIDAPGHRDF 358
RGIT+ A + + Y + +ID PGH DF
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDF 147
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 32.3 bits (70), Expect = 0.12
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
+G T+++ FET TI+DAPGH+ ++
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYV 45
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 32.3 bits (70), Expect = 0.12
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IEKFEKDAQEIFKG-SFKYAWVLDKLK 256
N+ V+ HVD GKST T L+ G I + + + + E +G + K + +
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLYYE 80
Query: 257 AERERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
E ++ + +Y + +ID+PGH DF
Sbjct: 81 MSDE---SLKSYKGDRDGNEYLINLIDSPGHVDF 111
>12_02_1045 +
25656495-25656566,25657788-25657884,25658327-25658419,
25658524-25658644,25659115-25659181,25659261-25659302,
25659455-25659583,25659674-25659733,25659887-25659929,
25660198-25660280,25660496-25661002,25661088-25661588
Length = 604
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 143 LIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLD 247
LI + G DE+ IE D EI + K WV+D
Sbjct: 411 LIREIEGDDEKLIEPLRADDDEIDEEEEKKCWVID 445
>05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320
Length = 627
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 193 EGRPGNF*GFLQIRLGIGQTKGRA*AWYHHRYCSLEVRNRQI 318
EG+ L++R+GIG KG A Y H C+ V +R I
Sbjct: 405 EGKDCKMDWTLRLRIGIGAAKGLA---YLHHTCNPRVLHRNI 443
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 77 KVHINIVVIGHVDSG 121
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>07_03_0576 +
19638725-19638779,19638988-19639144,19639871-19640113,
19640267-19640801,19640897-19641054,19641194-19641626
Length = 526
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 148 LQMRWYRRTYHRKVREGRPGNF 213
L+ R++ Y +K+REGR G F
Sbjct: 27 LERRFFSFVYEQKLREGRTGRF 48
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 26.2 bits (55), Expect = 7.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 309 VSNFQRAISMVIPRSRSAFSLSNTQAYLKEPLKISWASFSNF 184
V F+RA+S ++PR +AF + YL P W + +
Sbjct: 838 VPRFERALSRMLPRRDAAF--HHLGRYLLHPSNTVWGMVARY 877
>03_05_0341 +
23300588-23300710,23300958-23301363,23301463-23301671,
23301944-23302298,23302392-23302630,23303777-23304055
Length = 536
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 200 RPSRTFRWYVRRYHRICRSSDQL 132
RPS+ +WY R Y RI +S L
Sbjct: 268 RPSKRKKWYPRFYKRIDKSDHML 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,774,866
Number of Sequences: 37544
Number of extensions: 185198
Number of successful extensions: 526
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -