Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G13
(361 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 204 1e-53
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 204 1e-53
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 204 1e-53
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 204 1e-53
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 132 7e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 2e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 2e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 104 2e-23
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 2e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 50 6e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 50 6e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 50 6e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 47 5e-06
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 47 5e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 41 2e-04
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 41 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.060
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.060
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.10
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.10
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.56
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.3
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 28 1.7
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.3
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 2.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 2.3
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 27 3.0
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 3.9
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 3.9
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 27 5.2
U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alph... 27 5.2
AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeri... 27 5.2
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 26 6.9
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 26 6.9
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 6.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 26 6.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 26 6.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 26 9.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 26 9.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 26 9.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 26 9.1
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 26 9.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 26 9.1
AF039045-9|AAB94200.1| 315|Caenorhabditis elegans Hypothetical ... 26 9.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 204 bits (498), Expect = 1e-53
Identities = 93/99 (93%), Positives = 97/99 (97%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEK+AQE+ KGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 204 bits (498), Expect = 1e-53
Identities = 93/99 (93%), Positives = 97/99 (97%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEK+AQE+ KGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 204 bits (498), Expect = 1e-53
Identities = 93/99 (93%), Positives = 97/99 (97%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEK+AQE+ KGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 204 bits (498), Expect = 1e-53
Identities = 93/99 (93%), Positives = 97/99 (97%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEK+AQE+ KGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFI
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 132 bits (319), Expect = 7e-32
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +2
Query: 65 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVL 244
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEK+AQE+ KGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAER 265
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (274), Expect = 2e-26
Identities = 50/96 (52%), Positives = 69/96 (71%)
Frame = +2
Query: 74 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKL 253
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ +A K SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 254 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
+ ERERG+T+DI FET + ++DAPGH+DFI
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 262
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (274), Expect = 2e-26
Identities = 50/96 (52%), Positives = 69/96 (71%)
Frame = +2
Query: 74 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKL 253
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ +A K SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 254 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
+ ERERG+T+DI FET + ++DAPGH+DFI
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 280
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 104 bits (249), Expect = 2e-23
Identities = 45/98 (45%), Positives = 69/98 (70%)
Frame = +2
Query: 68 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLD 247
G K HIN+V +GHVD+GKST G L++ G +D+RT+EK+E++A+E + S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 248 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
ERE+G T+++ FET K + TI+DAPGH+ F+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
RGITI A + + IID PGH DF
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDF 125
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 71 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 251 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 126
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 71 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 251 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/97 (31%), Positives = 45/97 (46%)
Frame = +2
Query: 71 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDK 250
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 251 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E+ RGITI+ ++ET K + ID PGH D+I
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 47.6 bits (108), Expect = 3e-06
Identities = 30/90 (33%), Positives = 40/90 (44%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N ++ HVD GKST L+ CG + + +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQ------------------MLDKLQVERE 85
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 46.8 bits (106), Expect = 5e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = +2
Query: 77 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLK 256
K+++N+ IGH+D GK+T T + A++ F K+ + DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT--------------RVQAKKGFAKHIKFDEI-DKGK 87
Query: 257 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E++RGITI++A +E+ + D PGH DFI
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFI 122
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 46.8 bits (106), Expect = 5e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = +2
Query: 77 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLK 256
K+++N+ IGH+D GK+T T + A++ F K+ + DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT--------------RVQAKKGFAKHIKFDEI-DKGK 87
Query: 257 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 361
E++RGITI++A +E+ + D PGH DFI
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFI 122
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGI-----DERTIEKFEKDAQE----IFKGSFKYAWV 241
N+ VI HVD GKST T L+ K G I E KD QE I + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 242 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 358
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGI-----DERTIEKFEKDAQE----IFKGSFKYAWV 241
N+ VI HVD GKST T L+ K G I E KD QE I + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 242 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 358
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.1 bits (72), Expect = 0.060
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 71 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLD 247
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSR------------MAGKLRY---MD 59
Query: 248 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.060
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 71 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLD 247
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSR------------MAGKLRY---MD 59
Query: 248 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 44 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 151
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 44 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 151
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.56
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 343 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 254
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTT 136
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTT 136
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 47 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKD 199
IR+ K+GK K+ + ++ D GKS +L + C + + +E E D
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSF-CDAVGDDFMEYREFD 60
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETGKYYVTII 334
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 59 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERTIEKFEKDAQEIFK 217
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE +K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 59 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERTIEKFEKDAQEIFK 217
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE +K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETGKYYVTII 334
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETGKYYVTII 334
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 59 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERTIEKFEKDAQEIFK 217
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE +K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 200 AQEIFK-GSFKYAWVLDKLKAERERGITIDIALWKF 304
A+++F+ S K W LDKLK IT+ L ++
Sbjct: 207 ARDVFRDNSRKVYWTLDKLKVNASNAITVKNTLERY 242
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N+ + GH+ GK+T L+ E+T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYR--AEDADARFTDILFIEKQRGCSI 184
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ + I + Y + IID PGH +F
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNF 214
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
N+ + GH+ GK+T L+ E+T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYR--AEDADARFTDILFIEKQRGCSI 59
Query: 269 RGITIDIALWKFETGKYYVTIIDAPGHRDF 358
+ + I + Y + IID PGH +F
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNF 89
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 41 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC 157
+++R P+ ++ + + + V+G D GKST G L C
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGC 192
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 101 IGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFK 229
+ V+ G T + G +R ++ E + QEI KGSFK
Sbjct: 311 VAFVEDGALTIHRISRHADNGEQKREVKLLEMELQEIMKGSFK 353
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 101 IGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFK 229
+ V+ G T + G +R ++ E + QEI KGSFK
Sbjct: 324 VAFVEDGALTIHRISRHADNGEQKREVKLLEMELQEIMKGSFK 366
>U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alpha
subunit protein 12 protein.
Length = 355
Score = 26.6 bits (56), Expect = 5.2
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTTG--HLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKA 259
IN++++G +SGKST H+I+ G E T ++ Q+I++ + VL L A
Sbjct: 30 INLLLLGSGESGKSTFVKQMHIIH---GAGEFTADEVRAYRQQIYQNAISAMRVL--LDA 84
Query: 260 ERERGI 277
+ GI
Sbjct: 85 RNKLGI 90
>AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 26.6 bits (56), Expect = 5.2
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 86 INIVVIGHVDSGKSTTTG--HLIYKCGGIDERTIEKFEKDAQEIFKGSFKYAWVLDKLKA 259
IN++++G +SGKST H+I+ G E T ++ Q+I++ + VL L A
Sbjct: 30 INLLLLGSGESGKSTFVKQMHIIH---GAGEFTADEVRAYRQQIYQNAISAMRVL--LDA 84
Query: 260 ERERGI 277
+ GI
Sbjct: 85 RNKLGI 90
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 159 VVSTNVPSKSSRRTPRKFLRVPSN 230
+VS NVPS++ TP+ + PS+
Sbjct: 157 IVSNNVPSQTLPSTPKPYTATPSS 180
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 159 VVSTNVPSKSSRRTPRKFLRVPSN 230
+VS NVPS++ TP+ + PS+
Sbjct: 157 IVSNNVPSQTLPSTPKPYTATPSS 180
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
++R ++ EK+ + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DERTIEKFEKDAQEIFKGSFKYAWVLDKLKAERE 268
++R ++ EK+ + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 117 PASPQQLVT*STNAVVSTNVPSKSS 191
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 159 VVSTNVPSKSSRRTPRKFLRVPSN 230
+VS NVPS++ TP+ + PS+
Sbjct: 157 IVSNNVPSQTLPSTPKPYTATPSS 180
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 159 VVSTNVPSKSSRRTPRKFLRVPSN 230
+VS NVPS++ TP+ + PS+
Sbjct: 157 IVSNNVPSQTLPSTPKPYTATPSS 180
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 631 RWYKDRKEIFSGGLKYKIVIEK 652
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 1160 RWYKDRKEIFSGGLKYKIVIEK 1181
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 841 RWYKDRKEIFSGGLKYKIVIEK 862
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 631 RWYKDRKEIFSGGLKYKIVIEK 652
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 1160 RWYKDRKEIFSGGLKYKIVIEK 1181
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 841 RWYKDRKEIFSGGLKYKIVIEK 862
>Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical
protein F22B3.4 protein.
Length = 710
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 101 IGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKDAQEIFKGSFK 229
+ V+ G T + G +R ++ E + QEI KGS+K
Sbjct: 309 VAFVEDGSLTIHRISRHADSGEQKREVQLLELEIQEIMKGSYK 351
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 230 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGH 349
Y W+LD + A + R ++ + + + E+GK ++I PGH
Sbjct: 32 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGH 74
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 230 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGH 349
Y W+LD + A + R ++ + + + E+GK ++I PGH
Sbjct: 78 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGH 120
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 KFEKDAQEIFKGSFKYAWVLDK 250
++ KD +EIF G KY V++K
Sbjct: 50 RWYKDRKEIFSGGLKYKIVIEK 71
>AF039045-9|AAB94200.1| 315|Caenorhabditis elegans Hypothetical
protein F15E11.3 protein.
Length = 315
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 212 FKGSFKYAWVLDK 250
F GS KY WVLDK
Sbjct: 216 FFGSLKYIWVLDK 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,243,752
Number of Sequences: 27780
Number of extensions: 154188
Number of successful extensions: 537
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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