Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G08
(257 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 34 0.004
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 33 0.008
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 27 0.41
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 26 0.95
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 0.95
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 26 0.95
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 25 1.7
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 2.2
SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit |Schi... 24 2.9
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 24 2.9
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 24 2.9
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 23 5.1
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 23 5.1
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 23 5.1
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 23 5.1
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 23 6.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 23 6.7
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 23 6.7
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 23 6.7
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 23 8.9
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 23 8.9
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 33.9 bits (74), Expect = 0.004
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 72 CENVLTKFRYLVSHMHLH--YRNYICSVCDAGFITQSSLFTHSSCHKTGV 215
C T+ L SHM+ H YR + CS+C F Q H H TG+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH-TGI 625
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 32.7 bits (71), Expect = 0.008
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 72 CENVLTKFRYLVSHM--HLHYRNYICSVCDAGFITQSSLFTHSSCHKTG 212
C + + + SH+ HL R Y C +C AGF+ L H H+ G
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 0.41
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 63 CDVCENVLTKFRYLVSHMHLHYRNYICSV--CDAGFITQSSLFTH 191
CD C + + R +S H H Y C+ C+ F T+ L H
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNH 164
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.8 bits (54), Expect = 0.95
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -1
Query: 248 IEDTRAEVSRKNSSLMAGRVSKERALRYEPSVTYTADIIPIMQVHMTNQVTKL-CQHILA 72
++DT E + + S G +S + + Y + YTADI+ + + ++ + + L C +
Sbjct: 1606 VKDTFREFAEASVS---GLLSCDESFHYLTQLYYTADIVRNLWILLSQRNSLLKCMESVE 1662
Query: 71 DVALHHSVLKPHRHYTILV 15
A + LK H I +
Sbjct: 1663 FEAFDYEQLKGFEHLVIQI 1681
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 25.8 bits (54), Expect = 0.95
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 117 HLHYRNYICSVCDAGFITQ 173
H Y N +C+VCD G I Q
Sbjct: 1180 HKGYVNEVCTVCDVGGIGQ 1198
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 25.8 bits (54), Expect = 0.95
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 57 MQCDVCENVLTKFRYLVSHMHLHYRNYICSVCDAGFI 167
++C C VL YLVSH NY + C F+
Sbjct: 232 LRCKKCRFVLASSDYLVSHEPKDENNYSHTRCTHYFL 268
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 120 LHYRNYICSVCDAGFITQSSLFTHSSCHKTGVFXR 224
+H Y CSVCD I +S L T +S T F R
Sbjct: 143 IHNVRYKCSVCDDYDICESCL-TDNSHSNTHAFVR 176
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 24.6 bits (51), Expect = 2.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 242 DTRAEVSRKNSSLMAGRVSKERALRYEPSVTYTADIIPIM 123
D A + +SS+ + + RYEP V+ T +I P+M
Sbjct: 211 DEHAHAAPMHSSISISTLLSDSD-RYEPHVSLTENISPVM 249
>SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 24.2 bits (50), Expect = 2.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 45 ENGMMQCDVCENVLTKFRYLVSHMHLHY 128
++ M CDVC + +F+ L + L Y
Sbjct: 59 DSSTMNCDVCRLIEPEFKALANSYKLKY 86
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3
Query: 114 MHLHYRNYICSVCDAGFITQSSLFTHSSCHKTG 212
+HL R Y+C+ C + L +H K G
Sbjct: 7 VHLKSRCYVCAKCKTHLAFKGHLLSHDYRGKNG 39
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 24.2 bits (50), Expect = 2.9
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 24 RIVPMRFENGMMQCDVCENVLTKFRYLVSHMHLHYRNYICSVCDAGFITQSSLFTHSSCH 203
++ P + G + +C V+ L+S++ +H++ +IC D +S F+ +C
Sbjct: 236 QVSPKKTVEGFLGGWICTVVIGS---LISYVLMHFKYFICPTRD----LSTSAFSGLNCT 288
Query: 204 KTGVF 218
VF
Sbjct: 289 PNSVF 293
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 23.4 bits (48), Expect = 5.1
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +3
Query: 135 YICSVCDAGFITQSSLFTHSSCHKTG--VFXRDF--CTSVFN 248
Y C+ C GF SSL H+ H TG F D+ C FN
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSH-TGERPFVCDYAGCGKAFN 508
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 23.4 bits (48), Expect = 5.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 147 HCRYNSYNASAYD*PGNETLSAHS 76
H ++S D PGNE L +HS
Sbjct: 266 HAEHHSVPNMRNDTPGNEALPSHS 289
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 23.4 bits (48), Expect = 5.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 164 EPSVTYTADIIPIMQVHMTNQVTKLCQHILA 72
EP +A + P + VHM + VT+ Q + A
Sbjct: 61 EPGTVDSAALDPALTVHMQSLVTETAQLMAA 91
>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 23.4 bits (48), Expect = 5.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 138 ICSVCDAGFITQSSLFTHSSCH 203
+C+ CD F+++ HSSC+
Sbjct: 83 VCTKCDRPFLSEYIEDHHSSCN 104
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 153 HIHCRYNSYNASAYD*PGNETLSAHSRRRRTASFRSQTS 37
HI+ YN N S+ + G+E L S+ + +S++S
Sbjct: 312 HIYDIYNGKNVSSCNPSGSEYLQHASKLENSGIHQSKSS 350
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 23.0 bits (47), Expect = 6.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 120 LHYRNYICSVCDAGFITQSSLFTHSSCHK 206
L +N CS+ F + + + H+ CH+
Sbjct: 1680 LPQQNEKCSIYPLAFSPRFTYYRHTKCHR 1708
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 23.0 bits (47), Expect = 6.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 96 RYLVSHMHLHYRNYICSVC 152
R+L++H H+ R + S C
Sbjct: 353 RFLINHEHMRLRVFFSSCC 371
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 23.0 bits (47), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 251 RIEDTRAEVSRKNSSLMAGRVSKER 177
RIE +AE++ N SL RV K++
Sbjct: 266 RIERIKAEITELNHSLELLRVEKQQ 290
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 22.6 bits (46), Expect = 8.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 74 ADVALHHSVLKPHRHYT 24
A++A +++ HRHYT
Sbjct: 1511 AEIAFLRGLIQDHRHYT 1527
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 120 SAYD*PGNETLSAHSRRRRTASF 52
S D G+E SAH RR+ +F
Sbjct: 358 SLVDLAGSERASAHHERRKEGAF 380
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 985,433
Number of Sequences: 5004
Number of extensions: 16771
Number of successful extensions: 65
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 51555950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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