Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G04
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    91   8e-21
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           29   0.039
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        29   0.039
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.4  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   4.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   7.8  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 91.5 bits (217), Expect = 8e-21
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = +1

Query: 64  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVF+
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFE 68



 Score = 77.8 bits (183), Expect = 1e-16
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +2

Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 352
           +G    VSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR M
Sbjct: 63  KGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSM 116


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 0.039
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 209 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 352
           V+LA+L A SD             D+QG+ V      +DL+++KL +M
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYDIQGQVVFAKLKTLDLSSNKLAFM 228


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 0.039
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 209 VSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWM 352
           V+LA+L A SD             D+QG+ V      +DL+++KL +M
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFM 153


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 122  PRDKWAPPLSIAPRE 166
            P D W PP    P+E
Sbjct: 1746 PHDNWLPPCYYVPKE 1760


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 263 TCGKTFPHHYQPGDQQGRQS 204
           T G+T+ HHY P  +  RQS
Sbjct: 32  TMGETWLHHYTP--ESNRQS 49


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 104 KRRPCSPRDKWAPPLSIAP 160
           +RR C PR +  PP +  P
Sbjct: 502 RRRRCRPRARRNPPATTRP 520


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,979
Number of Sequences: 2352
Number of extensions: 7123
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)