Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G04
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 85 4e-17
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 85 4e-17
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 85 4e-17
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 85 4e-17
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 85 4e-17
BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein pr... 29 5.4
BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111... 29 5.4
AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens ... 29 5.4
AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens ... 29 5.4
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVF+
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFE 68
Score = 64.5 bits (150), Expect = 9e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSLADLQ D E +FRKF+LI EDVQG+N L NFHGMDLT DK+
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKM 110
>BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein
protein.
Length = 986
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 323 PCRGNCREHYVPGHPQR*V*TCGKTFPHHYQ 231
PC G+ + H+ GHP +C + HH+Q
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQ 513
>BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111
protein.
Length = 985
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 323 PCRGNCREHYVPGHPQR*V*TCGKTFPHHYQ 231
PC G+ + H+ GHP +C + HH+Q
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQ 513
>AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ16671 fis, clone THYMU3001428. ).
Length = 602
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 323 PCRGNCREHYVPGHPQR*V*TCGKTFPHHYQ 231
PC G+ + H+ GHP +C + HH+Q
Sbjct: 85 PCGGSSQNHHALGHPHT---SCFQQHGHHFQ 112
>AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens
cDNA FLJ16278 fis, clone NT2RI3001132, highly similar
to Mus musculus Arkadia (Arkadia) mRNA. ).
Length = 994
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 323 PCRGNCREHYVPGHPQR*V*TCGKTFPHHYQ 231
PC G+ + H+ GHP +C + HH+Q
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQ 513
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,425,132
Number of Sequences: 237096
Number of extensions: 1118458
Number of successful extensions: 2254
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2238
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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