Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_G04
(354 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 90 5e-19
U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical pr... 29 1.2
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 28 1.6
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 2.8
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 27 2.8
AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical ... 27 5.0
AC087079-11|AAK27869.1| 370|Caenorhabditis elegans Hypothetical... 27 5.0
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 89.8 bits (213), Expect = 5e-19
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFD 207
VDPF+RK+WYD+KAP+MF RQVG TL+NRTQGTKIASEGLKGRVF+
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFE 66
Score = 59.3 bits (137), Expect = 8e-10
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 191 RGVFLIVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKL 343
+G VSL DL +++E FRKF+LIAEDVQG+NVL NFH M +T DKL
Sbjct: 61 KGRVFEVSLGDL---NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKL 108
>U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical
protein T14B4.8 protein.
Length = 235
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 176 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 72
+ F+P++R R VPT +++ +G + Y +L G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 206 SKTRPFRPSDAIFVPWVRLTRVVPTCLLVNMDGA 105
SK +P R D I V R T CL V GA
Sbjct: 2176 SKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 RRPCSPRDKWAPPLSIAPREQKL 175
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 RRPCSPRDKWAPPLSIAPREQKL 175
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 RRPCSPRDKWAPPLSIAPREQKL 175
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 107 RRPCSPRDKWAPPLSIAPREQKL 175
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 328 EVHAVEIAENITSLDILSDKSELAE 254
E+H +E AE++ SL +L KSE+ +
Sbjct: 63 EMHIIEPAEHMKSLKVLMQKSEIEQ 87
>AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical
protein C24A1.3b protein.
Length = 765
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 313 EIAENITSLDILSDKSELAERPFRITISLEISKGDNQKH 197
E EN + +L ++ + + FR+ ISL++++G H
Sbjct: 593 EFVENGSLFRLLHEEKRVMDPAFRLRISLDVARGMRYLH 631
>AC087079-11|AAK27869.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.11 protein.
Length = 370
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -2
Query: 242 HHYQPGDQQGRQSKTRPFRPSDAIFVPWVRLTRVVPT 132
HH Q + + R + PW R++R +PT
Sbjct: 150 HHTQDEHIEQHVERARSLSTDNVAMSPWTRVSRFIPT 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,956,204
Number of Sequences: 27780
Number of extensions: 157594
Number of successful extensions: 359
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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