Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G03
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.45 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   0.78 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    20   7.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   9.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 0.45
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 66  NWLWSPFWQQ*SATR 110
           NWLW+PF ++  A R
Sbjct: 71  NWLWTPFIERGPANR 85


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 149 VSECIEKDTSLCLKEKALKFTERLAVSKDMN 241
           VS+ ++K   +CLKEK  +   ++ V++D N
Sbjct: 505 VSKWVQKG-QICLKEKENEIDFKIEVTEDCN 534


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 43  KILKNVEETGFG 78
           KILK  EE GFG
Sbjct: 226 KILKAAEEAGFG 237



 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 269 TGSARSARSYEPLA 310
           TG+A+   SY+P+A
Sbjct: 546 TGTAKMGPSYDPMA 559


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 101 TSLLPKRRPKPVSSTFFNIFIHNS 30
           T LL     K + S  +N+ +HNS
Sbjct: 450 TCLLASDALKQILSAAYNVELHNS 473


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 101 TSLLPKRRPKPVSSTFFNIFIHNS 30
           T LL     K + S  +N+ +HNS
Sbjct: 488 TCLLASDALKQILSAAYNVELHNS 511


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 170 DTSLCLKEKALKFTERLAVSKDMNIFEG 253
           +T L +K+ A+KF       +  N+F+G
Sbjct: 171 ETYLRIKKHAVKFNPAKVKLRFENLFDG 198


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 33  VVNKNIKKCGRNWL 74
           V    + KCGR W+
Sbjct: 123 VYRMQVDKCGRLWI 136


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 91  NSEVQPGKG 117
           NS+VQPG G
Sbjct: 268 NSDVQPGHG 276


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 341 QVGVPWSWVLQLKVRSCERN 282
           QV VP  W+++    S ERN
Sbjct: 705 QVKVPPRWIVEPTDVSVERN 724


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,167
Number of Sequences: 438
Number of extensions: 2273
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)