Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_G01
         (351 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...   109   7e-27
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   0.79 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   2.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   7.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   7.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   7.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   7.4  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score =  109 bits (263), Expect = 7e-27
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +3

Query: 33  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGN 188
           MGISRDHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN
Sbjct: 1   MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGN 52



 Score =  105 bits (252), Expect = 2e-25
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = +1

Query: 196 YRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 351
           YRALRLDTGNF+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DA
Sbjct: 55  YRALRLDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDA 106


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 265 YESCGLNIQIPMRSFQYQDAGHDIIVLPPRDLTKWMRWGP 146
           YE CGL  + PM SFQ    G  II +  +   + + W P
Sbjct: 653 YE-CGLRFEDPMISFQ---PGDTIICINIKRQKEKIEWDP 688


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 285 IINNINNTSLAG 250
           +INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 263 VLLMLFIMPLTMNWCVPRPW 322
           +L+   +MPL + W +   W
Sbjct: 85  LLVTFLMMPLEIGWAITVSW 104


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 248 QPARLVLLMLFIMPLTMNW 304
           QP  L+ L+   MPL  NW
Sbjct: 491 QPEPLIELIEHWMPLLPNW 509


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +3

Query: 54  WHKRRATGGKRAP 92
           WH  +   GKR P
Sbjct: 148 WHPGKIVNGKRVP 160


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -3

Query: 118 NSYFLFLRMGARLPPVALLLCQ*SRLIPILAGSEK 14
           +SY +F  MG+   P+ ++L    R+  ++A   +
Sbjct: 196 SSYVIFSAMGSFFLPMLVMLYVYGRISCVIASRHR 230


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 59  MPMITTDTHLGW 24
           M ++ TD+HL W
Sbjct: 95  MTLMWTDSHLSW 106


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +3

Query: 54  WHKRRATGGKRAP 92
           WH  +   GKR P
Sbjct: 148 WHPGKIVNGKRVP 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,035
Number of Sequences: 438
Number of extensions: 1987
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)