Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F21
         (364 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p pro...    33   0.085
AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-P...    33   0.085
BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p pro...    27   9.7  
AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,...    27   9.7  
AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,...    27   9.7  

>AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p
           protein.
          Length = 321

 Score = 33.5 bits (73), Expect = 0.085
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 317 FGSSVAIHKLRETKWF 364
           FGSSVA+ KLRE+KWF
Sbjct: 80  FGSSVAVQKLRESKWF 95


>AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-PA
           protein.
          Length = 321

 Score = 33.5 bits (73), Expect = 0.085
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 317 FGSSVAIHKLRETKWF 364
           FGSSVA+ KLRE+KWF
Sbjct: 80  FGSSVAVQKLRESKWF 95


>BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p
           protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 227 RPLAPQPTVKGLLSRFGSQAQALFAPKKPRFGSSVAIH 340
           RP AP+PT+ G+    G+ A AL +       + VAIH
Sbjct: 24  RPRAPEPTLSGVDHNAGATASALASGASS--AAPVAIH 59


>AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,
           isoform C protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 227 RPLAPQPTVKGLLSRFGSQAQALFAPKKPRFGSSVAIH 340
           RP AP+PT+ G+    G+ A AL +       + VAIH
Sbjct: 24  RPRAPEPTLSGVDHNAGATASALASGASS--AAPVAIH 59


>AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,
           isoform B protein.
          Length = 589

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 227 RPLAPQPTVKGLLSRFGSQAQALFAPKKPRFGSSVAIH 340
           RP AP+PT+ G+    G+ A AL +       + VAIH
Sbjct: 24  RPRAPEPTLSGVDHNAGATASALASGASS--AAPVAIH 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,732
Number of Sequences: 53049
Number of extensions: 317163
Number of successful extensions: 629
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)