Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F21
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   2.6  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   5.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   5.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   5.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   5.9  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   7.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   7.8  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 276  AARLRLCSHRRNHGLVHRSRSTSSV 350
            AA LRLC H R+   V R+ + + V
Sbjct: 1092 AAGLRLCLHHRDLPCVLRASTPAPV 1116


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 332 RPMNQTVVSSVRTEPE 285
           RP N+T++++V +E +
Sbjct: 117 RPQNETILTTVSSEAD 132


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 332 RPMNQTVVSSVRTEPE 285
           RP N+T++++V +E +
Sbjct: 165 RPQNETILTTVSSEAD 180


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 332 RPMNQTVVSSVRTEPE 285
           RP N+T++++V +E +
Sbjct: 165 RPQNETILTTVSSEAD 180


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 332 RPMNQTVVSSVRTEPE 285
           RP N+T++++V +E +
Sbjct: 165 RPQNETILTTVSSEAD 180


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 252 LKGSCLVSAARLRLCSHRRNHGLVHRSRST 341
           +  SC+++ A   L S      +VH   ST
Sbjct: 248 ISASCVIAFATSALVSKDSKFNMVHIQNST 277


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 125 VRVRSGVHIGML 160
           +R+R G+H GM+
Sbjct: 581 IRMRIGIHTGMV 592


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,891
Number of Sequences: 438
Number of extensions: 2012
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)