Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F19
(295 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z68302-4|CAB54515.1| 521|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 27 3.1
U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical pr... 27 3.1
U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical pr... 26 5.4
AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical ... 26 5.4
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70783-2|CAA94851.1| 195|Caenorhabditis elegans Hypothetical pr... 25 7.1
AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical... 25 7.1
U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical p... 25 9.4
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 25 9.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 25 9.4
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 25 9.4
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 25 9.4
AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical... 25 9.4
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 168 HVHTAVTLLSRYGTRWRFERRTKRHLL 248
HVH +L+ G W+ +RRT +L
Sbjct: 103 HVHDNTGILNSSGENWQLQRRTSLKIL 129
>Z68302-4|CAB54515.1| 521|Caenorhabditis elegans Hypothetical
protein ZK792.8 protein.
Length = 521
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 189 LLSRYGTRWRFERRTKRHLLLRRQE 263
+++R+G WRF RR + H+ E
Sbjct: 217 MVNRFGRDWRFTRRKRSHVAAHGDE 241
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 168 HVHTAVTLLSRYGTRWRFERRTKRHLL 248
HVH +L+ G W+ +RRT +L
Sbjct: 103 HVHDNTGILNSSGENWQLQRRTSLKIL 129
>U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical
protein C05D9.3 protein.
Length = 423
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 146 SDSEFSEELNNGGVEVSAVSSHSGDISRLCLYL 48
SDS+ +EL+ +S SG +SR+C+ L
Sbjct: 382 SDSDLEKELDESSSAKEEQTSSSGVVSRVCVLL 414
>U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical
protein C23F12.3 protein.
Length = 143
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 170 VRVWHKKKSDSEFSEELNNGGVEVSAVSSHSGDIS 66
++VW K++ + E + NNG + S+ S+ D S
Sbjct: 47 IKVWVKQQKEKELALNKNNGSGQASSSLSNRRDKS 81
>AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical
protein Y51A2A.5 protein.
Length = 635
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 274 WTDISWRRSSKWRFVRRSKRHLVP*RESNVTAVCTCAFGTR 152
W D++W+ S RFVR S+ P S + V C +G R
Sbjct: 567 WKDMNWKDMSWHRFVRESRPRKDPPWSSCRSEVGLC-YGWR 606
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 191 TFPLRHKMALRAPNKT-PLATTAPRNVRPKS 280
T P R + P +T P T APR VRPK+
Sbjct: 563 TIPPRTEAPRTEPPRTEPPKTEAPRTVRPKT 593
>Z70783-2|CAA94851.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.4 protein.
Length = 195
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 116 NGGVEVSAVSSHSGDISRLCLYLYLCIS 33
NG +EVSA+ +LC LY+C S
Sbjct: 72 NGAIEVSAMYFGWTPAVKLCHNLYMCAS 99
>AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical
protein Y73F8A.34a protein.
Length = 485
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 179 CMHVRVWHKKKSDSEFSEELN 117
C H+++W KK SD SE LN
Sbjct: 252 CRHMKMWRKKCSDD--SETLN 270
>U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical
protein F45E4.7b protein.
Length = 505
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 154 RRNPIRNSARSSTMAESRFQQYHRTRATYLDSVSIYISVSLSFSLVPNS 8
R+N + AR S + + R Q L V +YIS S SL PN+
Sbjct: 66 RQNLLSAFARDSLLRDPRDVQSQLDEVARL-MVDLYISARQSASLTPNT 113
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 154 RRNPIRNSARSSTMAESRFQQYHRTRATYLDSVSIYISVSLSFSLVPNS 8
R+N + AR S + + R Q L V +YIS S SL PN+
Sbjct: 345 RQNLLSAFARDSLLRDPRDVQSQLDEVARL-MVDLYISARQSASLTPNT 392
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 154 RRNPIRNSARSSTMAESRFQQYHRTRATYLDSVSIYISVSLSFSLVPNS 8
R+N + AR S + + R Q L V +YIS S SL PN+
Sbjct: 429 RQNLLSAFARDSLLRDPRDVQSQLDEVARL-MVDLYISARQSASLTPNT 476
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +1
Query: 178 QPSHYFPATAQDGASSAEQNATCYYG 255
Q S +P + + +S +QN++C++G
Sbjct: 2032 QGSMAYPGSKCNATTSCQQNSSCFFG 2057
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 169 TCIQPSHYFPATAQDGASSAEQNATC 246
TCI+ H F +++ D + Q TC
Sbjct: 130 TCIEGDHDFASSSTDYCADGSQQQTC 155
>AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical
protein C38C3.8 protein.
Length = 188
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 188 CDGCMHVRVWHKKKSDSEFSEELNNGGVEVSAVSS 84
C+ MHV +W++ S NNG VE S ++
Sbjct: 29 CEENMHVALWYEHGSPIFGRSWSNNGVVECSVTTN 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,360,264
Number of Sequences: 27780
Number of extensions: 112722
Number of successful extensions: 371
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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