Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F18
         (224 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    27   1.4  
Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AL132948-9|CAC51067.1|  256|Caenorhabditis elegans Hypothetical ...    27   2.4  
L13200-6|AAZ32790.1|  189|Caenorhabditis elegans Hypothetical pr...    26   3.1  
AF016420-6|AAB65311.3|  530|Caenorhabditis elegans Udp-glucurono...    26   4.1  
Z74041-7|CAA98518.2|  335|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AC090999-13|AAP46264.2|  256|Caenorhabditis elegans Hypothetical...    25   5.5  
U56965-6|AAB52669.1|  205|Caenorhabditis elegans Hypothetical pr...    25   7.2  
AF016442-8|AAB65916.1|  881|Caenorhabditis elegans Hypothetical ...    25   7.2  
Z49067-2|CAA88850.1|  283|Caenorhabditis elegans Hypothetical pr...    25   9.6  
AB038505-1|BAB11970.1|  283|Caenorhabditis elegans galectin LEC-...    25   9.6  

>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 11  FYLWQN*ILKNYETRIRGKNIYWLGPKNKIFKNYLKNIY 127
           F+L  N + K+  +  +  N ++   KNKIF   +KN+Y
Sbjct: 345 FFLIFNNLEKSIFSNFKKSNTFFQFSKNKIFNFLIKNLY 383


>Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 197 LLTHYFPIFLKKLIKTSFPLVTPHR 123
           LL   FP+F+   +  + PL+ PHR
Sbjct: 6   LLLFSFPVFIYSEVNHATPLILPHR 30


>Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 197 LLTHYFPIFLKKLIKTSFPLVTPHR 123
           LL   FP+F+   +  + PL+ PHR
Sbjct: 6   LLLFSFPVFIYSEVNHATPLILPHR 30


>AL132948-9|CAC51067.1|  256|Caenorhabditis elegans Hypothetical
           protein Y39B6A.10 protein.
          Length = 256

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
 Frame = +2

Query: 35  LKNYETRIRGKN------IYWLGPKNKIFKNYLKNIYEG*PVGRKFLLVFSEKSENNVLI 196
           LK + T++ G +      IY+ G K+KI++N+ +N+ E      +   +++E  EN  ++
Sbjct: 176 LKQFFTKMLGNSTSGTHLIYFFGAKSKIYENF-ENLTENRRFCAEIKEIYAENGENRGIL 234


>L13200-6|AAZ32790.1|  189|Caenorhabditis elegans Hypothetical
           protein ZK1236.9 protein.
          Length = 189

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 24  KIKY*KIMKLVLEEKISTGLVQKIKYL 104
           K+++  + KL+ EEK+S  L++ + Y+
Sbjct: 103 KLRFGSLAKLISEEKLSDELIKSLNYV 129


>AF016420-6|AAB65311.3|  530|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein7 protein.
          Length = 530

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = +2

Query: 41  NYETRIRGKNIYWLGPKNKIFKNYLKNIYEG*PVGRKFLLVFSEKSENNVLIIF 202
           NYE    GK  Y   PK+ + K +  N         +F    S+  E+  L +F
Sbjct: 73  NYEANTAGKEFYRNRPKSSVTKYWTTNQAANPSAADQFAEAMSKDLEHMCLQVF 126


>Z74041-7|CAA98518.2|  335|Caenorhabditis elegans Hypothetical
           protein T03F7.4 protein.
          Length = 335

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -1

Query: 206 TEKLLTHYFPIFLKKLIKTSFPLVTPHRYFLNSF*IFYFLDQASRYFFL*YEFHNF 39
           T+KL   YF     ++I     +  P  YF+ S    Y+   A+ + FL    H F
Sbjct: 237 TKKLKRKYFLSVCIQVIIPIVIMAFPVSYFVLSIVTDYYSQMANNFSFLIMSLHGF 292


>AC090999-13|AAP46264.2|  256|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.21 protein.
          Length = 256

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 216 IIYYGKIINTLFSDFS 169
           II YGK   TL+SDFS
Sbjct: 212 IIQYGKKAKTLYSDFS 227


>U56965-6|AAB52669.1|  205|Caenorhabditis elegans Hypothetical
           protein C15H9.10 protein.
          Length = 205

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -1

Query: 215 LYITEKLLTHYFPIFLKKLIKTSFPLVTPHRYFLNSF*IFYFLDQASRYFFL*Y--EFHN 42
           +++   LL  YF   LK +     PLV     F NSF I       S  F   Y  + H 
Sbjct: 138 IHVLNSLLDFYFSAALKMVENDEQPLVKYVPAFSNSFPILTSTAFDSPLFNSLYSSDIHQ 197

Query: 41  FLVFNF 24
           F V+ F
Sbjct: 198 FAVYVF 203


>AF016442-8|AAB65916.1|  881|Caenorhabditis elegans Hypothetical
           protein K12B6.1 protein.
          Length = 881

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 98  IFKNYLKNIYEG*PVGRKFLLVFSEKSENN 187
           I + YL++I+E      + L++F  KS NN
Sbjct: 530 INRGYLRSIFENAKAANRQLIMFITKSMNN 559


>Z49067-2|CAA88850.1|  283|Caenorhabditis elegans Hypothetical
           protein C44F1.3 protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 87  QKIKYLKTI*KISMRGDQWEGSFY 158
           Q I+YL     +S+ G  W G FY
Sbjct: 127 QSIEYLSVRGDLSLNGIHWGGRFY 150


>AB038505-1|BAB11970.1|  283|Caenorhabditis elegans galectin LEC-4
           protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 87  QKIKYLKTI*KISMRGDQWEGSFY 158
           Q I+YL     +S+ G  W G FY
Sbjct: 127 QSIEYLSVRGDLSLNGIHWGGRFY 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,888,664
Number of Sequences: 27780
Number of extensions: 81630
Number of successful extensions: 200
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)