Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F15
         (198 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002372-1|AAH02372.1|  463|Homo sapiens zinc finger protein 207...    71   7e-13
AF046001-1|AAC78561.1|  478|Homo sapiens ZNF207 protein.               71   7e-13
AB209215-1|BAD92452.1|  496|Homo sapiens zinc finger protein 207...    71   7e-13

>BC002372-1|AAH02372.1|  463|Homo sapiens zinc finger protein 207
           protein.
          Length = 463

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +2

Query: 8   AIHCMQVHKEAVDKVPNSLPNRSNIEIEIYGMEGIPPEDI 127
           AIHCMQVHKE +D VPN++P R++IE+EIYGMEGIP +D+
Sbjct: 51  AIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIPEKDM 90


>AF046001-1|AAC78561.1|  478|Homo sapiens ZNF207 protein.
          Length = 478

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +2

Query: 8   AIHCMQVHKEAVDKVPNSLPNRSNIEIEIYGMEGIPPEDI 127
           AIHCMQVHKE +D VPN++P R++IE+EIYGMEGIP +D+
Sbjct: 51  AIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIPEKDM 90


>AB209215-1|BAD92452.1|  496|Homo sapiens zinc finger protein 207
           variant protein.
          Length = 496

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +2

Query: 8   AIHCMQVHKEAVDKVPNSLPNRSNIEIEIYGMEGIPPEDI 127
           AIHCMQVHKE +D VPN++P R++IE+EIYGMEGIP +D+
Sbjct: 54  AIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIPEKDM 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,712,946
Number of Sequences: 237096
Number of extensions: 262517
Number of successful extensions: 799
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1394963598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)