Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F14
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 30 0.45
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 30 0.45
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 1.0
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 1.0
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 1.8
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 27 2.4
AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical... 27 2.4
AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical... 27 2.4
AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical ... 27 2.4
U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 26 5.5
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z19152-10|CAA79545.2| 348|Caenorhabditis elegans Hypothetical p... 26 5.5
U41270-4|ABC71847.1| 266|Caenorhabditis elegans Hypothetical pr... 26 5.5
U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic anhyd... 26 7.3
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 26 7.3
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 26 7.3
Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical pr... 25 9.7
U43375-3|AAA83620.1| 110|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 29.9 bits (64), Expect = 0.45
Identities = 21/92 (22%), Positives = 43/92 (46%)
Frame = +1
Query: 10 RRSRIVDPPGCRNSARGLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 189
RR+ + D R+ YET + L++ + +DIVA F + + F + + +
Sbjct: 1211 RRAAVNDIRNVRSCPSSSYETTLRELKQLGNAQMDIVA-FEEAVKNLFPGDIVLFNNIDK 1269
Query: 190 IVTEMFKDITRLIVAQLKELPGKITQVYEELV 285
+ + + K+I A+ +E P K+ Y + +
Sbjct: 1270 LFSSLAKNIHHATCAEERENPIKLYLKYRQRI 1301
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein
F02E9.4a protein.
Length = 1505
Score = 29.9 bits (64), Expect = 0.45
Identities = 21/92 (22%), Positives = 43/92 (46%)
Frame = +1
Query: 10 RRSRIVDPPGCRNSARGLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTN 189
RR+ + D R+ YET + L++ + +DIVA F + + F + + +
Sbjct: 1209 RRAAVNDIRNVRSCPSSSYETTLRELKQLGNAQMDIVA-FEEAVKNLFPGDIVLFNNIDK 1267
Query: 190 IVTEMFKDITRLIVAQLKELPGKITQVYEELV 285
+ + + K+I A+ +E P K+ Y + +
Sbjct: 1268 LFSSLAKNIHHATCAEERENPIKLYLKYRQRI 1299
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 223 LIVAQLKELPGKITQVYEELVKLINNMPIIEAI 321
+I+A KEL ITQ+Y+ VKL +P ++AI
Sbjct: 100 VIIAPTKEL---ITQIYKLFVKLSQALPFLQAI 129
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 223 LIVAQLKELPGKITQVYEELVKLINNMPIIEAI 321
+I+A KEL ITQ+Y+ VKL +P ++AI
Sbjct: 167 VIIAPTKEL---ITQIYKLFVKLSQALPFLQAI 196
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 178 ELTNIVTEMFKDITRL--IVAQLKELPGKITQVYEELVKLINNMPIIEAIKEK 330
EL + TE I RL + ++ E K Q EEL + + ++EA KEK
Sbjct: 357 ELDQVKTETNDKIRRLTEVTSEFAEYRKKFQQQEEELRRKARLLTVVEAAKEK 409
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 34 PGCRNSARGLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKD 213
P RN + ++ + ++L E+ S HF F +K+KLEI++ + ++
Sbjct: 817 PWYRNLEQPVFYYVAEILPEWRPSSKFPDTHFETFNEYFIKKYKLEIYDQNQSLLDVDFT 876
Query: 214 ITRLIVAQ 237
TRL + Q
Sbjct: 877 STRLNLLQ 884
>AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.16 protein.
Length = 501
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 73 LGKMLQEYLESFIDIVAHFGALISDFFEKHKLE-----IHELTNIVTEMFKDITRLIVAQ 237
+GK++ E ++ FG+L+ D + K E + EL N+ +++ + +++ +V Q
Sbjct: 114 IGKIVFEKFPKYLQFFGPFGSLLKDILDMTKPEKKDPVLEELGNLKSQL-ESLSQKMVVQ 172
Query: 238 LKEL 249
EL
Sbjct: 173 FDEL 176
>AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.15 protein.
Length = 501
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 73 LGKMLQEYLESFIDIVAHFGALISDFFEKHKLE-----IHELTNIVTEMFKDITRLIVAQ 237
+GK++ E ++ FG+L+ D + K E + EL N+ +++ + +++ +V Q
Sbjct: 114 IGKIVFEKFPKYLQFFGPFGSLLKDILDMTKPEKKDPVLEELGNLKSQL-ESLSQKMVVQ 172
Query: 238 LKEL 249
EL
Sbjct: 173 FDEL 176
>AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical
protein F45D11.14 protein.
Length = 508
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 73 LGKMLQEYLESFIDIVAHFGALISDFFEKHKLE-----IHELTNIVTEMFKDITRLIVAQ 237
+GK++ E ++ FG+L+ D + K E + EL N+ +++ + +++ +V Q
Sbjct: 121 IGKIVFEKFPKYLQFFGPFGSLLKDILDMTKPEKKDPVLEELGNLKSQL-ESLSQKMVVQ 179
Query: 238 LKEL 249
EL
Sbjct: 180 FDEL 183
>U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical
protein F13D11.3 protein.
Length = 186
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 118 VAHFGALISDFFEKHKLEIH-ELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKLI 294
+A +G + +++ + + TN+ T+ K + R+ V KITQ +E +VK I
Sbjct: 20 LAGYGCITPSLLKQYNITHGVDCTNLKTKPIKGLDRIEVPVDDNTLAKITQYFEPVVKYI 79
Query: 295 NN 300
+
Sbjct: 80 ED 81
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +1
Query: 124 HFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQ 237
HF ++ +FF + + E ++T++FK + ++V +
Sbjct: 386 HF-KIVDEFFAEPTCRVSEAPRLLTDLFKKLKEMVVQE 422
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +1
Query: 124 HFGALISDFFEKHKLEIHELTNIVTEMFKDITRLIVAQ 237
HF ++ +FF + + E ++T++FK + ++V +
Sbjct: 386 HF-KIVDEFFAEPTCRVSEAPRLLTDLFKKLKEMVVQE 422
>Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical
protein M28.1 protein.
Length = 647
Score = 26.2 bits (55), Expect = 5.5
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 73 LGKMLQEYLESFIDIVAHFGALI--SDFFEKHKLEIHELTNIVTEMFKDITRLIVAQLKE 246
L K +EY +F VA FG LI S FF + + L +V+ F T + +
Sbjct: 506 LRKTFEEYERTFCVSVASFGILISASTFFATISIAVQFL--LVSRFFCVQTEKLAEKSTN 563
Query: 247 LPGKITQVYEELVKLI 294
P + Y E+ K++
Sbjct: 564 TPLSMRYSYFEIRKIL 579
>Z19152-10|CAA79545.2| 348|Caenorhabditis elegans Hypothetical
protein B0464.8 protein.
Length = 348
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 82 MLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKD 213
+LQE +SF D F +D E H ++ L I+ +M D
Sbjct: 187 LLQEAQKSFFDAGLDFNTFENDVDENHNQQLIVLQTILEDMNAD 230
>U41270-4|ABC71847.1| 266|Caenorhabditis elegans Hypothetical
protein AH9.6 protein.
Length = 266
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 181 LTNIVTEMFKDITRLIVAQLKELPGKITQVYEE 279
+TN +T+MF ++ +LI+ + E P V ++
Sbjct: 31 ITNWLTQMFMELKKLIITKQLEQPASANDVMKK 63
>U23517-10|AAB93341.3| 337|Caenorhabditis elegans Carbonic
anhydrase protein 2 protein.
Length = 337
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 151 FEKHKLEIHELTNIVTEMFKDITRLIVAQLKELPGKIT 264
++ H + I+ NIV +F++ +L V +K+LP + T
Sbjct: 48 YDPHLMPINIEGNIVEAVFENTGQLPVVTVKDLPNRPT 85
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 163 KLEIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKL 291
K ++ + V E ++ RL+ AQ KEL GK+ + EE+ L
Sbjct: 30 KTKVEQAEQTVAEKSINVRRLM-AQQKELNGKVRLLKEEISHL 71
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 163 KLEIHELTNIVTEMFKDITRLIVAQLKELPGKITQVYEELVKL 291
K ++ + V E ++ RL+ AQ KEL GK+ + EE+ L
Sbjct: 51 KTKVEQAEQTVAEKSINVRRLM-AQQKELNGKVRLLKEEISHL 92
>Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical
protein Y57G11C.7 protein.
Length = 571
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 40 CRNSARGLYETLGKMLQEYLESFIDIVAHFGALISDFFEKHKLEIHELTNIVTEMFKD 213
CRN + Y K +Q +S + HF + +F +E+T + E KD
Sbjct: 243 CRNKTKNNYNKCFKRIQLNFQSEKSFLGHF---LQNFLSLKTTNFNEITVKMEEKLKD 297
>U43375-3|AAA83620.1| 110|Caenorhabditis elegans Hypothetical
protein K09C4.7 protein.
Length = 110
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 7 WRRSRIVDPPGCRNSARGLYETLGKMLQEYLES 105
W ++ + C+N RG YE+ L YLES
Sbjct: 26 WNQNTFIKTGECQN--RGKYESPDSRLSNYLES 56
>AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical
protein F56A11.4 protein.
Length = 468
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -2
Query: 140 MSAPKCATISMKLSRYSCSILPKVSYSPRAEFL 42
++A ++ RY CS+ + +SP+ FL
Sbjct: 159 IAASTLLIVAASFERYICSLKSSIQFSPQRRFL 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,882,544
Number of Sequences: 27780
Number of extensions: 107702
Number of successful extensions: 415
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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