Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F14
         (330 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    26   0.14 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    26   0.14 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   3.9  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   5.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   5.1  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   6.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   8.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.14
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 228 N*TSYVLKHFSHDIGELVNFQFMFLEEVTDECAEVCDDIDEAF 100
           N T Y LK ++HDI E  N    F  +V DE  +    + EA+
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKF-RDVLDEFPQPKHMLIEAY 288


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.14
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 228 N*TSYVLKHFSHDIGELVNFQFMFLEEVTDECAEVCDDIDEAF 100
           N T Y LK ++HDI E  N    F  +V DE  +    + EA+
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKF-RDVLDEFPQPKHMLIEAY 288


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 211 DITRLIVAQLKELPGKITQVYEELVKLINNMPIIEAIKE 327
           D  + +V +LK  PGK+  +  +L    + + +IE +++
Sbjct: 42  DKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEK 80


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 265 QVYEELVKLINNMPIIEAIKEK 330
           + +EEL +L+    I  AIKEK
Sbjct: 295 KAFEELEELLGKRNICIAIKEK 316


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 110 MKLSRYSCSILPKVSYSPRAEFLQPGGS 27
           +KL+    S   K     + EFL PGGS
Sbjct: 49  IKLNNIPKSYGIKCEIYAKCEFLNPGGS 76


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 136 LISDFFEKHKLEIHELTNIVTEMFKDITRLIV 231
           LI D F+     I  +  I+    + ITR I+
Sbjct: 47  LIKDLFDNVHNHIQNIFKIIKSTNEKITRYII 78


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 136 LISDFFEKHKLEIHELTNIVTEMFKDITRLIV 231
           LI D F+     I  +  I+    + ITR I+
Sbjct: 30  LIKDLFDNVHNHIQNIFKIIKSTNEKITRYII 61


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 103 SFIDIVAHFGALISDFFEKHKLEIHELTNIVTE 201
           SF+D   +F   +S    K  L  +E+  ++TE
Sbjct: 71  SFVDKDGNFNEHVSREIAKIFLNENEINQLITE 103


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 26  WIPRAAGIRHEG 61
           W+P+   +RH+G
Sbjct: 132 WVPQKYRLRHKG 143


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 26  WIPRAAGIRHEG 61
           W+P+   +RH+G
Sbjct: 132 WVPQKYRLRHKG 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,848
Number of Sequences: 438
Number of extensions: 1166
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)