Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F13
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.6  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   2.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.6  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   4.6  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   4.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.6  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   6.0  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    20   8.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 342 LFXXXXXXLDNLMRLEHIKT*PSRY 268
           LF       +NLM+LE     PSR+
Sbjct: 514 LFSSQQKTKNNLMKLETTPVLPSRF 538


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 160 NTAFEKNLRKVCRKVINKHCLEGGMKKTADVVSY 59
           N   +  +R+ C++   K CL  GM+    V  Y
Sbjct: 228 NCEIDMYMRRKCQECRLKKCLTVGMRPECVVPEY 261


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 160 NTAFEKNLRKVCRKVINKHCLEGGMKKTADVVSY 59
           N   +  +R+ C++   K CL  GM+    V  Y
Sbjct: 25  NCEIDMYMRRKCQECRLKKCLTVGMRPECMVPEY 58


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 268 YYS*KAAFKTCSDLFSTRNQYGV 200
           YY+ K A      +  T N+YGV
Sbjct: 440 YYTYKGAHSISEIMSGTSNKYGV 462


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 145 KNLRKVCRK 119
           KNLRKVC K
Sbjct: 37  KNLRKVCSK 45


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 145 KNLRKVCRK 119
           KNLRKVC K
Sbjct: 11  KNLRKVCSK 19


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 268 YYS*KAAFKTCSDLFSTRNQYGV 200
           YY+ K A      +  T N+YGV
Sbjct: 440 YYTYKGAHSISEIMSGTSNKYGV 462


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 258 EKPLSKLVATSSRQEISTAFKIKV*KLNAN 169
           E  L KLV  ++R+ IS   K+    +NAN
Sbjct: 93  EIQLDKLVEMANRKNISIDVKMLSECINAN 122


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
          finger domain-Z1 isoform protein.
          Length = 111

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -1

Query: 60 IHLTHARPSDVPSCRI 13
          I   H RPS  P C I
Sbjct: 22 IQNVHTRPSKEPICNI 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,067
Number of Sequences: 438
Number of extensions: 1453
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)