Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F12
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 194 1e-50
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 188 1e-48
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 179 5e-46
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 179 5e-46
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 174 1e-44
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 169 3e-43
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 169 3e-43
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 165 7e-42
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 162 5e-41
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 159 4e-40
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 116 3e-27
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 116 3e-27
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 105 7e-24
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 83 6e-17
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 71 3e-13
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 71 3e-13
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 68 2e-12
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 27 2.4
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 27 4.2
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 27 4.2
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 27 4.2
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 27 4.2
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 27 4.2
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 27 4.2
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 25 9.7
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 25 9.7
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 25 9.7
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 25 9.7
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 25 9.7
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 25 9.7
AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 194 bits (473), Expect = 1e-50
Identities = 94/108 (87%), Positives = 100/108 (92%)
Frame = +2
Query: 5 GRGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 184
G K F PEE+SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+GLN
Sbjct: 110 GENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLN 169
Query: 185 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
VLRIINEPTAAAIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGI
Sbjct: 170 VLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGI 217
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 188 bits (457), Expect = 1e-48
Identities = 91/108 (84%), Positives = 98/108 (90%)
Frame = +2
Query: 5 GRGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 184
G K F PEE+SSMVL KMK+TAEA+L TV++AV+TVP YFNDSQRQATKDAG I+GLN
Sbjct: 110 GENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLN 169
Query: 185 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
VLRIINEPTAAAIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGI
Sbjct: 170 VLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGI 217
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 179 bits (435), Expect = 5e-46
Identities = 85/105 (80%), Positives = 98/105 (93%)
Frame = +2
Query: 14 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 193
K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+R
Sbjct: 143 KQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVR 202
Query: 194 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
IINEPTAAAIAYGLDKK GERN+L+FDLGGGTFDVS+LTI++G+
Sbjct: 203 IINEPTAAAIAYGLDKK-DGERNILVFDLGGGTFDVSMLTIDNGV 246
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 179 bits (435), Expect = 5e-46
Identities = 85/105 (80%), Positives = 98/105 (93%)
Frame = +2
Query: 14 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 193
K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+R
Sbjct: 143 KQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVR 202
Query: 194 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
IINEPTAAAIAYGLDKK GERN+L+FDLGGGTFDVS+LTI++G+
Sbjct: 203 IINEPTAAAIAYGLDKK-DGERNILVFDLGGGTFDVSMLTIDNGV 246
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 174 bits (424), Expect = 1e-44
Identities = 82/105 (78%), Positives = 97/105 (92%)
Frame = +2
Query: 14 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 193
K F PEEVS+MVLTKMK+ AE+YLG V+NAV+TVPAYFND+Q+QATKDAG+I+GLNV+R
Sbjct: 140 KQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVR 199
Query: 194 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
IINEPTAAAIAYGLDKK GERN+L+FDLGGGTFDVS+LTI+ G+
Sbjct: 200 IINEPTAAAIAYGLDKK-DGERNILVFDLGGGTFDVSLLTIDSGV 243
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 169 bits (412), Expect = 3e-43
Identities = 82/107 (76%), Positives = 93/107 (86%)
Frame = +2
Query: 5 GRGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 184
G + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN
Sbjct: 109 GEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLN 168
Query: 185 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 325
+RIINEPTAAA+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G
Sbjct: 169 AIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 169 bits (412), Expect = 3e-43
Identities = 82/107 (76%), Positives = 93/107 (86%)
Frame = +2
Query: 5 GRGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 184
G + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN
Sbjct: 109 GEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLN 168
Query: 185 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 325
+RIINEPTAAA+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G
Sbjct: 169 AIRIINEPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 165 bits (401), Expect = 7e-42
Identities = 80/107 (74%), Positives = 93/107 (86%)
Frame = +2
Query: 5 GRGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 184
G + F EE+S+MVL KMKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+GLN
Sbjct: 109 GEKREFNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLN 168
Query: 185 VLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG 325
+RIINEPTAAA+AYGLDK T E+N+LIFDLGGGTFDVSIL+I +G
Sbjct: 169 AIRIINEPTAAALAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEG 215
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 162 bits (394), Expect = 5e-41
Identities = 76/107 (71%), Positives = 91/107 (85%)
Frame = +2
Query: 8 RGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 187
+GK + P +V + VL KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISGLNV
Sbjct: 135 QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNV 194
Query: 188 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
LR+INEPTAAA+AYGLD K G++ + ++DLGGGTFDVSIL I+ G+
Sbjct: 195 LRVINEPTAAALAYGLD-KDAGDKIIAVYDLGGGTFDVSILEIQKGV 240
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 159 bits (386), Expect = 4e-40
Identities = 75/107 (70%), Positives = 90/107 (84%)
Frame = +2
Query: 8 RGKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 187
+GK + P +V + VL KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISGLNV
Sbjct: 135 QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNV 194
Query: 188 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
LR+INEPTAAA+AYGLD K G++ + ++DLGGGTFDVSIL I+ G+
Sbjct: 195 LRVINEPTAAALAYGLD-KDAGDKIIAVYDLGGGTFDVSILEIQKGV 240
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 116 bits (280), Expect = 3e-27
Identities = 56/95 (58%), Positives = 74/95 (77%)
Frame = +2
Query: 35 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTA 214
VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTA
Sbjct: 116 VSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTA 175
Query: 215 AAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 319
AAIAY L + RN+LI+DLGGGTFDV+ + ++
Sbjct: 176 AAIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVD 210
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 116 bits (280), Expect = 3e-27
Identities = 56/95 (58%), Positives = 74/95 (77%)
Frame = +2
Query: 35 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTA 214
VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTA
Sbjct: 116 VSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTA 175
Query: 215 AAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 319
AAIAY L + RN+LI+DLGGGTFDV+ + ++
Sbjct: 176 AAIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVD 210
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 105 bits (252), Expect = 7e-24
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +2
Query: 14 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 193
K +PEE+ S+++ +K A +LG T+ VI+ PA FN+ QR T A I+ + V R
Sbjct: 147 KNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRR 206
Query: 194 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGI 328
+I+EPTAAA+AYGL KK G NV++ DLGGGT DVS+L ++ G+
Sbjct: 207 VISEPTAAALAYGLHKK-QGVENVVVVDLGGGTLDVSVLWLQGGV 250
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 82.6 bits (195), Expect = 6e-17
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Frame = +2
Query: 2 IGRGKTFFPEEVSSMVLTKMKETAEAYLG--KTVQNAVITVPAYFNDSQRQATKDAGTIS 175
+G TF PE+V + +LTK++ E+ L K V + V+ VP+YF D QR+A A +
Sbjct: 106 LGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYA 165
Query: 176 GLNVLRIINEPTAAAIAYGLDKKGTGE-----RNVLIFDLGGGTFDVSILTIEDG 325
GLN LRI+NE TA A+AYG+ K+ E RNV+ D+G + S++ G
Sbjct: 166 GLNSLRIVNETTAIALAYGIYKQDLPEEDAKSRNVVFLDIGHSSTQASLVAFNRG 220
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 70.5 bits (165), Expect = 3e-13
Identities = 35/88 (39%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 208
E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+++N+
Sbjct: 123 ETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDG 182
Query: 209 TAAAIAYGL-DKKGTGER--NVLIFDLG 283
+AAA+ YG+ +K E+ ++LI+D+G
Sbjct: 183 SAAALNYGVFRRKEITEKPTHMLIYDMG 210
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 70.5 bits (165), Expect = 3e-13
Identities = 35/88 (39%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 208
E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+++N+
Sbjct: 139 ETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDG 198
Query: 209 TAAAIAYGL-DKKGTGER--NVLIFDLG 283
+AAA+ YG+ +K E+ ++LI+D+G
Sbjct: 199 SAAALNYGVFRRKEITEKPTHMLIYDMG 226
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 67.7 bits (158), Expect = 2e-12
Identities = 34/104 (32%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = +2
Query: 11 GKTFFPEEVSSMVLTKMKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 187
G+++ E +++M+L K+ E Y +++ VITVP YF ++R A + A ++GL V
Sbjct: 132 GESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTV 191
Query: 188 LRIINEPTAAAIAYGL-DKKGTGER--NVLIFDLGGGTFDVSIL 310
L++IN+ TAAA+++G+ +K GE+ ++++D+G +I+
Sbjct: 192 LQLINDGTAAALSHGIFRRKEIGEKPQRLMVYDMGAAKTTATIV 235
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 212 AAAIAYGLDKKGTGERNVLIFDLGGGTFD 298
AAA +G D K G + + F LGGG+ D
Sbjct: 705 AAAGEFGCDNKFLGFQRRMTFHLGGGSLD 733
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 368 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 404
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 373 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 409
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 384 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 420
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 373 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 409
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 368 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 404
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 384 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 420
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 368 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 404
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 373 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 409
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 384 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 420
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 373 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 409
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 368 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 404
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IPSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRPYAIA 217
+PS + RM+T++ PP +K + F + Y IA
Sbjct: 384 VPSILNRMETNEAPPTYNKTNKFTKGFQNIVDAYGIA 420
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 15 RPSSLRRSARWCSQK*RKLP 74
RP S+RR WCS+ ++ P
Sbjct: 136 RPPSMRRRYSWCSENVKRKP 155
>Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical
protein C14A6.5 protein.
Length = 550
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 322 ILDGQDGHIEGAAAEVKDEYVSFSSTLLVKAVRNRSSCRFIDNTKNIQ 179
IL+ ++ +EG EVKD + F + + AV + DN N++
Sbjct: 157 ILNLRNSDLEGLDPEVKDTVMYFRNIEMENAVFGKKPADDSDNDANVK 204
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 PAYFNDSQRQATKDAGTISGLNVLR-IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 295
P FN+S+R A +A L +LR ++ + LD+ G ++ +LG
Sbjct: 988 PTIFNNSERSALHEAVVNKDLRILRHLLTDKRLLKEIDELDRNGMTALMLVARELGKHQV 1047
Query: 296 DVSILTIEDG 325
+++ L + G
Sbjct: 1048 EMAELLLSKG 1057
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 PAYFNDSQRQATKDAGTISGLNVLR-IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 295
P FN+S+R A +A L +LR ++ + LD+ G ++ +LG
Sbjct: 988 PTIFNNSERSALHEAVVNKDLRILRHLLTDKRLLKEIDELDRNGMTALMLVARELGKHQV 1047
Query: 296 DVSILTIEDG 325
+++ L + G
Sbjct: 1048 EMAELLLSKG 1057
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 324 PSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRP 229
PS V T++VPPPR +T R F S P
Sbjct: 56 PSDSVSR-TARVPPPRLASATVRRTESFNSAP 86
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 324 PSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRP 229
PS V T++VPPPR +T R F S P
Sbjct: 254 PSDSVSR-TARVPPPRLASATVRRTESFNSAP 284
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 324 PSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRP 229
PS V T++VPPPR +T R F S P
Sbjct: 322 PSDSVSR-TARVPPPRLASATVRRTESFNSAP 352
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
glp-1 gene,complete cds. ).
Length = 1295
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 PAYFNDSQRQATKDAGTISGLNVLR-IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 295
P FN+S+R A +A L +LR ++ + LD+ G ++ +LG
Sbjct: 988 PTIFNNSERSALHEAVVNKDLRILRHLLTDKRLLKEIDELDRNGMTALMLVARELGKHQV 1047
Query: 296 DVSILTIEDG 325
+++ L + G
Sbjct: 1048 EMAELLLSKG 1057
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 324 PSSMVRMDTSKVPPPRSKMSTFRSPVPFLSRP 229
PS V T++VPPPR +T R F S P
Sbjct: 254 PSDSVSR-TARVPPPRLASATVRRTESFNSAP 284
>AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2a protein.
Length = 456
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 321 SSMVRMDTSKVPPPRSKMSTFR-SPVPFLSRPYAIAAAV 208
S M S++P PRS++ T R S +P R +++AAAV
Sbjct: 393 SKMGTPTASRIPTPRSRLPTPRGSNLP--KRVHSVAAAV 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,361,845
Number of Sequences: 27780
Number of extensions: 138938
Number of successful extensions: 447
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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