Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F11
(329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 212 4e-56
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 212 4e-56
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 211 8e-56
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 211 8e-56
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 210 2e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 209 3e-55
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 116 4e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 116 4e-27
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 85 9e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 85 9e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 85 9e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 85 9e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 83 3e-17
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 82 1e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 82 1e-16
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 82 1e-16
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 82 1e-16
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 81 2e-16
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 80 3e-16
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 80 3e-16
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 80 3e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 79 7e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 79 7e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 71 2e-13
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 44 2e-05
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 1.8
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 1.8
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 27 3.2
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 26 5.5
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 26 5.5
AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical... 26 7.3
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical pr... 25 9.7
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 25 9.7
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 212 bits (518), Expect = 4e-56
Identities = 96/101 (95%), Positives = 100/101 (99%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
AATF+GNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 212 bits (518), Expect = 4e-56
Identities = 96/101 (95%), Positives = 100/101 (99%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
AATF+GNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 211 bits (516), Expect = 8e-56
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ATFIGNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 211 bits (516), Expect = 8e-56
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ATFIGNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 210 bits (513), Expect = 2e-55
Identities = 95/101 (94%), Positives = 100/101 (99%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
AATF+GNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 209 bits (511), Expect = 3e-55
Identities = 94/101 (93%), Positives = 100/101 (99%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 205
DPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 206 AATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ATFIGNSTAIQEL KRISEQFTAMFRRKAFLHWYTGEGMD
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 116 bits (279), Expect = 4e-27
Identities = 52/94 (55%), Positives = 72/94 (76%)
Frame = +2
Query: 38 GRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF 217
G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATF
Sbjct: 306 GKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATF 365
Query: 218 IGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGE 319
I NSTAIQE KRIS+QF +FRRKAFLHWYT E
Sbjct: 366 IANSTAIQEPLKRISKQFAGLFRRKAFLHWYTME 399
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 116 bits (279), Expect = 4e-27
Identities = 52/94 (55%), Positives = 72/94 (76%)
Frame = +2
Query: 38 GRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF 217
G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATF
Sbjct: 306 GKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATF 365
Query: 218 IGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGE 319
I NSTAIQE KRIS+QF +FRRKAFLHWYT E
Sbjct: 366 IANSTAIQEPLKRISKQFAGLFRRKAFLHWYTME 399
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 9e-18
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 85.4 bits (202), Expect = 9e-18
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 305 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 364
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 365 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 413
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 85.4 bits (202), Expect = 9e-18
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 85.4 bits (202), Expect = 9e-18
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 83.4 bits (197), Expect = 3e-17
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 193
DPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K + PP
Sbjct: 306 DPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 194 ----GLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
L+ A + N+TAIQE R+ +F M+ ++AF+HWY GEGM+
Sbjct: 366 GDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGME 414
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 81.0 bits (191), Expect = 2e-16
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 193
DPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K + PP
Sbjct: 311 DPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 370
Query: 194 ----GLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
L+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 371 ADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 419
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 80.2 bits (189), Expect = 3e-16
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K + PP
Sbjct: 301 DPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPG 360
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E +R+ +F M+ ++AF+HWY GEGM+
Sbjct: 361 GDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGME 409
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 80.2 bits (189), Expect = 3e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 304 DPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 80.2 bits (189), Expect = 3e-16
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP----- 190
DPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 304 DPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 191 ---RGLKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 412
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 79.0 bits (186), Expect = 7e-16
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL-- 199
DPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP +
Sbjct: 312 DPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPG 371
Query: 200 ------KMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ I N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 372 GDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 420
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 79.0 bits (186), Expect = 7e-16
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL-- 199
DPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP +
Sbjct: 284 DPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPG 343
Query: 200 ------KMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ I N+TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 344 GDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 392
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 70.9 bits (166), Expect = 2e-13
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG 196
DP G+Y+ V ++RG + K+V+ + +++ K FV+W P K + I G
Sbjct: 309 DPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEG 368
Query: 197 -----LKMAATFIGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ A + N+TAI E R+ +F M+ ++AF+HW+ GEGM+
Sbjct: 369 GDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGME 417
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 44.4 bits (100), Expect = 2e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 218 IGNSTAIQELCKRISEQFTAMFRRKAFLHWYTGEGMD 328
+ ++TAI E R+ +F M+ ++AF+HWY GEGM+
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGME 49
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 88 LHRHT 74
L T
Sbjct: 813 LESMT 817
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 88 LHRHT 74
L T
Sbjct: 811 LESMT 815
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 88 LHRHT 74
L T
Sbjct: 813 LESMT 817
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 88 LHRHT 74
L T
Sbjct: 813 LESMT 817
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 88 LHRHT 74
L T
Sbjct: 811 LESMT 815
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 88 LHRHT 74
L T
Sbjct: 813 LESMT 817
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 268 LFRDALAQLLDGGRVTDKGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 89
+F +++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 88 LHRHT 74
L T
Sbjct: 813 LESMT 817
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 288 RLNIAVNCSEMRLHSSWMAVELPIKVAAIFSPR 190
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 221 GNSTAIQELCKRISEQFTAMFRR 289
G T I+E+C +IS F +FRR
Sbjct: 137 GKPTIIREICVQISNMFGHLFRR 159
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 50 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 148
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical
protein ZK287.7 protein.
Length = 387
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 199 QSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDFLHR 80
+ G AHG + + P H + + +L ++H DF++R
Sbjct: 327 EDVGGHEAHGLVAAAKPPAHFIAMLDLLGLRHAYKDFMNR 366
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 307 PVQESLASEHSGELFRDALAQLLDGGRVTDKGRRHLQSAGRDV-AHGGLHVVRDPFHE 137
P +++ S S ++FRD +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 307 PVQESLASEHSGELFRDALAQLLDGGRVTDKGRRHLQSAGRDV-AHGGLHVVRDPFHE 137
P +++ S S ++FRD +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical
protein Y17G7B.23 protein.
Length = 308
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 273 VNCSEMRLHSSWMAVELPIKVA-AIFSPRGGMSHTAVFTLFG 151
+ C+ L W A LP+K A +F + G ++ V T+ G
Sbjct: 14 IQCATSNLMEDWGATGLPLKPANLLFDDKCGTPNSLVSTVSG 55
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 176 CDIPPRGLKMAATFIGNST------AIQELCKRISEQFTAMFRRKAFLHWYT 313
C I PR + T I N T +QEL K I E+ R+ + W T
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWST 734
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 176 CDIPPRGLKMAATFIGNST------AIQELCKRISEQFTAMFRRKAFLHWYT 313
C I PR + T I N T +QEL K I E+ R+ + W T
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWST 734
>Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical
protein ZK507.4 protein.
Length = 206
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 145 MDPEQREDRRVRHPAPRTEDGGDL 216
+DPE+ +R+ H T+D GD+
Sbjct: 92 IDPEEERERKEDHKKELTDDVGDM 115
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 176 CDIPPRGLKMAATFIGNST------AIQELCKRISEQFTAMFRRKAFLHWYT 313
C I PR + T I N T +QEL K I E+ R+ + W T
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWST 734
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +2
Query: 125 NSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELCKR 256
N + + N + D PPR KM FI + + +LC++
Sbjct: 133 NDAIIATYNQENPDFELLDEPPRLAKMLQVFIASHRNLAKLCEK 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,584,148
Number of Sequences: 27780
Number of extensions: 141737
Number of successful extensions: 477
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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