Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F11
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   6.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   6.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   8.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 252 LHSSWMAVELPIKVAAIFSPRG 187
           +HSS   + LP++V   F   G
Sbjct: 218 VHSSSFCIPLPVRVLPNFPSSG 239


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 139 RGMDPEQREDRRVRHPAPRT 198
           R  D E+RE ++ + P+P T
Sbjct: 348 RPSDKEEREAQKSQKPSPVT 367


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 125 NSSYFVEWIPNNVKTAVCD 181
           NS +F E+  NN++  V D
Sbjct: 334 NSEHFFEYGGNNIEIIVKD 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,571
Number of Sequences: 438
Number of extensions: 1543
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)