Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F10
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   147   2e-37
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.8  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   3.2  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  147 bits (357), Expect = 2e-37
 Identities = 64/91 (70%), Positives = 80/91 (87%)
 Frame = +3

Query: 213 LVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVALTNVESGDRAAFSKVVEAIKTN 392
           LV++LPALCRKMGVPYCI+KGK+RLG LV+RKTCT VALT  E+ D+   +K+VE IKTN
Sbjct: 172 LVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQFENADKPNLAKLVETIKTN 231

Query: 393 FNERYEELRRHWGGGVLGNKSNARIAKLEKA 485
           FN+R++++RRHWGGG+LG KS AR+AKLEKA
Sbjct: 232 FNDRFDDIRRHWGGGLLGPKSMARLAKLEKA 262



 Score = 72.1 bits (169), Expect = 9e-15
 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 14  EKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKKKAQLVVIAH 193
           +KYRPE                    +EPP KR N LR G N+V K+VE+KKAQLV+IAH
Sbjct: 106 KKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVEQKKAQLVIIAH 165

Query: 194 DVDPI-LTCALPA 229
           DVDPI L   LPA
Sbjct: 166 DVDPIELVVYLPA 178


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 360  FSKVVEAIKTNFNERYEELRRHWG 431
            FS+ +     NF+  + EL+R WG
Sbjct: 1856 FSRTIPFFGGNFSPEHTELQRTWG 1879


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 360  FSKVVEAIKTNFNERYEELRRHWG 431
            FS+ +     NF+  + EL+R WG
Sbjct: 1857 FSRTIPFFGGNFSPEHTELQRTWG 1880


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 239 AKRWQEEHKLRLGLRHER 186
           AKRW E+H  +L L+ E+
Sbjct: 676 AKRWDEKHMAQLKLQKEK 693


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 272 LHDTVRDSHLTAKRWQEEHKLRLGL 198
           LHD  RD  L +++++ E+KL   L
Sbjct: 424 LHDASRDLVLLSEKFEAEYKLTTNL 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,186
Number of Sequences: 2352
Number of extensions: 8943
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)