Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F07
         (191 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1 ...    28   4.6  
AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.     28   4.6  
AY393607-1|AAR02481.1|  150|Homo sapiens immunoglobulin heavy ch...    27   8.1  

>AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1
           protein.
          Length = 2341

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 111 SEANIIRRXHQYQSVLNSATSGHSCSVTE 25
           S A+ ++  HQ+ S  +S+T+ HSC   E
Sbjct: 609 SRASSVQSAHQFSSDSSSSTTSHSCQSPE 637


>AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 111 SEANIIRRXHQYQSVLNSATSGHSCSVTE 25
           S A+ ++  HQ+ S  +S+T+ HSC   E
Sbjct: 757 SRASSVQSAHQFSSDSSSSTTSHSCQSPE 785


>AY393607-1|AAR02481.1|  150|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 150

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 173 YIICKKTYFVKFIFNFGGISSLKPISFGGXTNTSLF 66
           Y   + TYF +++F++ G  +L  +S       S+F
Sbjct: 90  YYCARATYFAEYVFDYWGQGTLVTVSSASTKGPSVF 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,819,297
Number of Sequences: 237096
Number of extensions: 403299
Number of successful extensions: 768
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)