Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F06
         (250 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   0.85 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   0.85 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   1.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   2.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   2.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    19   6.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 0.85
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 182 RTGPFTFLMI*RLVS 138
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 0.85
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 182 RTGPFTFLMI*RLVS 138
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 98  DPVRPSTFTTRARTLGLSILNYISSFEKSSC 6
           +PV    F  RAR  G  +   +++ + +SC
Sbjct: 327 NPVVYGVFNIRARRTGRKVSPRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 98  DPVRPSTFTTRARTLGLSILNYISSFEKSSC 6
           +PV    F  RAR  G  +   +++ + +SC
Sbjct: 327 NPVVYGVFNIRARRTGRKVSPRVNTIKHTSC 357


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -2

Query: 75  HDTSKNVRLIHFELYIELREIL 10
           +D ++   L HF  Y+++  +L
Sbjct: 235 YDETRGTMLSHFAYYVDMANML 256


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 171 LHVPDDLTASLSDELH 124
           + +P D TAS  DE H
Sbjct: 177 IEIPQDFTASDLDEEH 192


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 113 LRSKWSSSERLAVRSSGT*RDLSA 184
           L   WSS     ++SS    DLS+
Sbjct: 16  LECNWSSGPNATLQSSACTDDLSS 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,223
Number of Sequences: 336
Number of extensions: 925
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)