Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F05
(175 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 1.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 1.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 20 2.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 3.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 3.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 3.2
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 19 5.5
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 19 5.5
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 19 5.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 7.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 7.3
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 19 7.3
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 19 7.3
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 18 9.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 18 9.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 18 9.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 18 9.6
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 18 9.6
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 1.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNIVAFLEVLCLLGHRDPYLEELP 23
SS++ N++YS N+N L + Y+E++P
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFN 89
SS++ N++YS N+N
Sbjct: 83 SSLSNNYNYSNYNNYN 98
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 103 SCNFNIVAFLEVLCLL-GHRD 44
SC IVA + V CLL HRD
Sbjct: 523 SC-LGIVATMAVACLLFHHRD 542
Score = 19.4 bits (38), Expect = 4.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 21 DGSSSRYGSRWPRRQRTSRNATI 89
+GS YG R+ T RN I
Sbjct: 147 EGSYGEYGIEVFTREATERNVCI 169
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.8 bits (39), Expect = 3.2
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 68 DLQECDDIKV 97
D+Q CD +K+
Sbjct: 322 DIQNCDSVKI 331
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 103 SCNFNIVAFLEVLCLL-GHRD 44
SC IVA + V CLL HRD
Sbjct: 613 SC-LGIVATMAVACLLFHHRD 632
Score = 19.4 bits (38), Expect = 4.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 21 DGSSSRYGSRWPRRQRTSRNATI 89
+GS YG R+ T RN I
Sbjct: 237 EGSYGEYGIEVFTREATERNVCI 259
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 126 LTELHQTKCSLC 161
+TE QT+C C
Sbjct: 67 ITEAFQTQCKKC 78
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 21 DGSSSRYGSRWPRRQRTSRNATILKLHDVE 110
DG + G+R+ Q TIL+ H VE
Sbjct: 439 DGPRNCIGARFAVYQTKVGLITILRNHKVE 468
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 126 LTELHQTKCSLC 161
+TE QT+C C
Sbjct: 67 ITEAFQTQCKKC 78
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 18.6 bits (36), Expect = 7.3
Identities = 4/8 (50%), Positives = 7/8 (87%)
Frame = +2
Query: 23 WELLQVWV 46
WE+ +VW+
Sbjct: 125 WEVFKVWI 132
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -1
Query: 64 CLLGHRDPYLEELPSYQPR 8
C L H DP + + Y P+
Sbjct: 318 CYLSHVDPDVVQYFGYLPQ 336
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 124 ENHHYSTSCNFNIVAF 77
+ + Y T C NIV +
Sbjct: 499 DTYTYDTICQLNIVHY 514
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein
protein.
Length = 238
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -1
Query: 64 CLLGHRDPYLEELPSYQPR 8
C L H DP + + Y P+
Sbjct: 24 CYLSHVDPDVVQYFGYLPQ 42
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 18.2 bits (35), Expect = 9.6
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 127 NENHHYSTSCNFNIVAFLEVLCLLGHRDPYL 35
+EN + S C VA + + PYL
Sbjct: 265 SENQNTSAECKLAKVALMTISLWFMAWTPYL 295
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 132 ELHQTKCSLC 161
E +KCSLC
Sbjct: 268 EFGDSKCSLC 277
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNI 86
S+ N N++Y+ +NI
Sbjct: 94 SNYNNNNNYNKKLYYNI 110
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 136 SSVNENHHYSTSCNFNI 86
S+ N N++Y+ +NI
Sbjct: 332 SNYNNNNNYNKKLYYNI 348
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 18.2 bits (35), Expect = 9.6
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 127 NENHHYSTSCNFNIVAFLEVLCLLGHRDPYL 35
+EN + S C VA + + PYL
Sbjct: 15 SENQNTSAECKLAKVALMTISLWFMAWTPYL 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,228
Number of Sequences: 438
Number of extensions: 738
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used: 2602740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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