Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F03
(282 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 128 1e-31
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 128 1e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 116 8e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 112 1e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 87 6e-19
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 59 1e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 1e-06
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.031
SPBC428.03c |pho4||thiamine-repressible acid phosphatase Pho4|Sc... 25 2.1
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 25 2.1
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 2.1
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 2.7
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 24 3.6
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 4.7
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 4.7
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar... 23 6.3
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 23 8.3
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 23 8.3
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 23 8.3
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 128 bits (310), Expect = 1e-31
Identities = 59/69 (85%), Positives = 66/69 (95%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNN 255
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 256 TIFDAERLI 282
TIFDA+RLI
Sbjct: 64 TIFDAKRLI 72
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 128 bits (310), Expect = 1e-31
Identities = 59/69 (85%), Positives = 66/69 (95%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNN 255
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 256 TIFDAERLI 282
TIFDA+RLI
Sbjct: 64 TIFDAKRLI 72
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 116 bits (278), Expect = 8e-28
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNN 255
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAK+Q AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 256 TIFDAERLI 282
T+FDA+RLI
Sbjct: 68 TVFDAKRLI 76
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 112 bits (269), Expect = 1e-26
Identities = 50/68 (73%), Positives = 59/68 (86%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNNT 258
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAK+Q NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 259 IFDAERLI 282
IFD +RLI
Sbjct: 98 IFDIKRLI 105
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 86.6 bits (205), Expect = 6e-19
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 55 NKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKS 231
N+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 232 QVAMNPNNTIFDAERLI 282
Q +NP NT F +RLI
Sbjct: 105 QAVINPENTFFATKRLI 121
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.8 bits (136), Expect = 1e-10
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = +1
Query: 64 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAM 243
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAKS A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 244 NPNNTIFDAERL 279
N NT+ +RL
Sbjct: 63 NFRNTVGSLKRL 74
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 46.0 bits (104), Expect = 1e-06
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNNT 258
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 259 IFDAERLI 282
+ + L+
Sbjct: 87 VTNFRDLL 94
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.1 bits (67), Expect = 0.031
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNN 255
+ ID GT ++ + + G +EI+ R S VAF ER+ G A + P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 256 TIFDAERLI 282
+I + + L+
Sbjct: 85 SIRNVKELL 93
>SPBC428.03c |pho4||thiamine-repressible acid phosphatase
Pho4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 2.1
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 251 LGFIATWLLAASPIRRSVSVNATYEGVVLLPWSLAMISTF--PCWNTPT 111
L I+ WLLAAS + S +E L IS + P +N PT
Sbjct: 3 LSGISLWLLAASIVHAGKSQFEAFENEFYFKDHLGTISVYHEPYFNGPT 51
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.0 bits (52), Expect = 2.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1
Query: 243 HRNLALGCITDKTLSVGERN 184
H+++ L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 2.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 277 DVQHQRWCYWGSSQPGSWLH 218
D+Q QR CY + +WLH
Sbjct: 400 DIQWQRVCYKSFRESRTWLH 419
Score = 23.0 bits (47), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 248 GFIATWLLAASPIRRSVS 195
GFI W++AA PI S +
Sbjct: 1567 GFIRIWIMAALPIAISTA 1584
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 82 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 168
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 141 LNFPMLEHTHTRVGCAQIDTN 79
L+ + EHTH R+ Q+D+N
Sbjct: 375 LDHELYEHTHKRMTQMQVDSN 395
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 4.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIAND 156
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 154 DQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
Gda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 556
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 10 SYELFND*LSIRYKRNKMAKAPAVGIDLGTTYSCVGVFQ 126
S + +D S+ Y +K + + ID G+T S V V+Q
Sbjct: 113 SSSIDSDDCSVAYDNSKPVRQYVLMIDAGSTGSRVHVYQ 151
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 23.0 bits (47), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 277 DVQHQRWCYWGSSQPGSW 224
D++ C+W S P SW
Sbjct: 417 DIEDPSKCHWHSEVPESW 434
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEII 147
K PA+G D+G T + V + GK E I
Sbjct: 306 KTPAIGFDMGGTSTDVSRYD-GKFEHI 331
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 23.0 bits (47), Expect = 8.3
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +2
Query: 71 HQQLVSI--WAQPTLVWVCSSMG 133
H +VS WA L+W CS G
Sbjct: 314 HDSIVSTMHWASTELLWSCSKDG 336
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,182,076
Number of Sequences: 5004
Number of extensions: 21443
Number of successful extensions: 80
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 63619130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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