Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_F03
(282 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 142 5e-35
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 142 5e-35
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 127 1e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 127 1e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 127 1e-30
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 114 8e-27
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 112 4e-26
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 112 4e-26
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 74 2e-14
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 74 2e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 68 9e-13
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 68 9e-13
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 59 4e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 52 8e-08
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.003
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 30 0.29
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 30 0.29
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 30 0.29
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 27 1.6
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 2.7
U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical p... 26 4.8
Z47357-1|CAA87421.2| 479|Caenorhabditis elegans Hypothetical pr... 25 6.3
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 25 6.3
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 25 6.3
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 25 8.4
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 142 bits (343), Expect = 5e-35
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 241 MNPNNTIFDAERLI 282
MNP+NT+FDA+RLI
Sbjct: 61 MNPHNTVFDAKRLI 74
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 142 bits (343), Expect = 5e-35
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK+QVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 241 MNPNNTIFDAERLI 282
MNP+NT+FDA+RLI
Sbjct: 61 MNPHNTVFDAKRLI 74
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 127 bits (307), Expect = 1e-30
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNPNNTIFDAERLI 282
NP NT+FDA+RLI
Sbjct: 61 RNPENTVFDAKRLI 74
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 127 bits (307), Expect = 1e-30
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNPNNTIFDAERLI 282
NP NT+FDA+RLI
Sbjct: 61 RNPENTVFDAKRLI 74
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 127 bits (306), Expect = 1e-30
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNPNNTIFDAERLI 282
NP NT+FDA+RLI
Sbjct: 61 RNPENTVFDAKRLI 74
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 114 bits (275), Expect = 8e-27
Identities = 54/70 (77%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKSQVAMNPN 252
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAK+Q+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 253 NTIFDAERLI 282
NTIFDA+RLI
Sbjct: 93 NTIFDAKRLI 102
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 112 bits (269), Expect = 4e-26
Identities = 52/70 (74%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKSQVAMNPN 252
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAK+Q+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 253 NTIFDAERLI 282
NTIFDA+RLI
Sbjct: 96 NTIFDAKRLI 105
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 112 bits (269), Expect = 4e-26
Identities = 52/70 (74%), Positives = 63/70 (90%), Gaps = 2/70 (2%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKSQVAMNPN 252
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAK+Q+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 253 NTIFDAERLI 282
NTIFDA+RLI
Sbjct: 96 NTIFDAKRLI 105
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 73.7 bits (173), Expect = 2e-14
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKSQVAM 243
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 244 NPNNTIFDAERLI 282
N NT+F +RLI
Sbjct: 90 NSANTLFATKRLI 102
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 73.7 bits (173), Expect = 2e-14
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKSQVAM 243
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 244 NPNNTIFDAERLI 282
N NT+F +RLI
Sbjct: 90 NSANTLFATKRLI 102
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 68.1 bits (159), Expect = 9e-13
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKSQVAMNPN 252
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 253 NTIFDAERLI 282
N++FD +R+I
Sbjct: 61 NSLFDVKRII 70
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 68.1 bits (159), Expect = 9e-13
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKSQVAMNPN 252
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 253 NTIFDAERLI 282
N++FD +R+I
Sbjct: 61 NSLFDVKRII 70
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 59.3 bits (137), Expect = 4e-10
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 82 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKSQVAMNPN 252
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 253 NTIFDAERLI 282
TI+DA+R I
Sbjct: 97 RTIYDAKRFI 106
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 51.6 bits (118), Expect = 8e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKSQVAMNPNNT 258
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 259 IFDAERLI 282
+ + + LI
Sbjct: 64 VINFKHLI 71
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 225
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 29.9 bits (64), Expect = 0.29
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 49 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 92 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 29.9 bits (64), Expect = 0.29
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 49 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 29.9 bits (64), Expect = 0.29
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 49 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K+N K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 275 RSASKMVLLGFIATWLLA 222
R+ ++LLGFI TW+LA
Sbjct: 197 RTTGVLILLGFIETWILA 214
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +2
Query: 128 MGKLRSSPMTRATELRPR------TLRSPTLSVLSVMQPRARLR*TPITP 259
MG +S+P+T AT R + P +L MQP TP+TP
Sbjct: 438 MGMTQSTPVTGATGSTGRHHSSDILFKVPPSKILDTMQPMGSTGMTPLTP 487
>U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical
protein F37A4.1 protein.
Length = 482
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 248 GFIATWLLAASPIRRSVSVNATYEGVVLLPWSLAMISTF 132
GF WL + P ++V ++AT++ LLP +L + TF
Sbjct: 304 GFPVAWLASNYPNVKAVVLDATFDD--LLPLALFRMPTF 340
>Z47357-1|CAA87421.2| 479|Caenorhabditis elegans Hypothetical
protein ZK1128.2a protein.
Length = 479
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 49 KRNKMAKAPAVGIDLGTTYSCV 114
K NK+ K +GID+GT SC+
Sbjct: 94 KANKLTKN-VIGIDIGTGTSCI 114
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 65 QKHQQLVSIWAQPTLVWVCSSMGKLRSSPMTRATELRPRTLRSPTLSVL 211
QK ++ A PTL VCSS + +S T TE+ R LR +VL
Sbjct: 29 QKFKRFFPPNAPPTLWEVCSSKQRSKSLKNTFQTEV--RALRGLNFTVL 75
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 65 QKHQQLVSIWAQPTLVWVCSSMGKLRSSPMTRATELRPRTLRSPTLSVL 211
QK ++ A PTL VCSS + +S T TE+ R LR +VL
Sbjct: 29 QKFKRFFPPNAPPTLWEVCSSKQRSKSLKNTFQTEV--RALRGLNFTVL 75
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 282 DKTFSIKDGVIGVHRNLALGCITDKTLSVGE-RNVRGRSSVALVIGDDLNFPMLE 121
DK S KD + LALGC+ S+G +++ SV L + ++ P ++
Sbjct: 918 DKLNSCKDEINRSGHVLALGCLHRHVGSLGSGQHLNTGVSVVLALAEESKMPKVQ 972
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,660,491
Number of Sequences: 27780
Number of extensions: 125876
Number of successful extensions: 364
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -