Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_F02
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   0.87 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   0.87 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   8.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   8.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.1  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 126 QPTLVWVCSGMGKLRSSPMTRATELRPRTLRSPTLSVLSVMQPR 257
           QPTL  +CS  G    S     T   P T  + T+S  + +  R
Sbjct: 74  QPTLRLLCSIAGGTSESQWEDVTGSTPLTFVNDTVSFTTTVSAR 117


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 75  TKETKWQKHQQLVSIWAQPTLVWVCS 152
           T+  K+ KH+    +W    LVW  S
Sbjct: 289 TQPIKYAKHKNNRRVWLTILLVWAIS 314


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 158 HAGTHPHKSRLC 123
           H G  PHK  +C
Sbjct: 170 HTGERPHKCTVC 181


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 87  KWQKHQQLVSIWA 125
           K  K QQ++ IWA
Sbjct: 28  KLSKKQQMLGIWA 40


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 259 ALGCITDKTLSVGERNVRGRSSVALVIGDDLNFPMPEHTHTRVGCAQIDTNCW 101
           ++G +  + +S GER     S+  ++   +  + +P          Q+  +CW
Sbjct: 823 SMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEAIYQLMLDCW 875


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 107 VGIDLGTTYSCVGVFRHGKV 166
           V ++ G  YSC+   R GKV
Sbjct: 489 VMVEDGGEYSCMAENRAGKV 508



 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 239  IGDAAKSQVA-MNPNNTI 289
            +G AA++  A ++PNNT+
Sbjct: 1719 LGGAAEASAAGLHPNNTL 1736


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 107 VGIDLGTTYSCVGVFRHGKV 166
           V ++ G  YSC+   R GKV
Sbjct: 489 VMVEDGGEYSCMAENRAGKV 508



 Score = 19.8 bits (39), Expect = 8.1
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 239  IGDAAKSQVA-MNPNNTI 289
            +G AA++  A ++PNNT+
Sbjct: 1715 LGGAAEASAAGLHPNNTL 1732


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,407
Number of Sequences: 438
Number of extensions: 1622
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)